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Lj0g3v0115109.1

Overview

Field Value
Gene ID Lj0g3v0115109
Transcript ID Lj0g3v0115109.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: protein grpE-like [Glycine max] gi|356515837|ref|XP_003526604.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR21237:SF4
17 289 273 7.80E-115 –
PANTHER
PTHR21237
17 289 273 7.80E-115
IPR000740
Hamap
MF_01151
76 286 211 16.505
IPR000740
Coils
Coil
119 139 21 – –
Pfam
PF01025
128 285 158 7.30E-41
IPR000740
Gene3D
G3DSA:3.90.20.20
131 229 99 5.00E-22
IPR013805
SUPERFAMILY
SSF58014
134 229 96 9.55E-19 –
CDD
cd00446
151 284 134 7.98E-43
IPR000740
PRINTS
PR00773
155 171 17 5.30E-21
IPR000740
PRINTS
PR00773
183 198 16 5.30E-21
IPR000740
Gene3D
G3DSA:2.30.22.10
231 288 58 1.70E-18
IPR009012
SUPERFAMILY
SSF51064
232 287 56 4.84E-14
IPR009012
PRINTS
PR00773
238 253 16 5.30E-21
IPR000740
ProSitePatterns
PS01071
241 284 44 –
IPR000740
PRINTS
PR00773
265 284 20 5.30E-21
IPR000740
MobiDBLite
mobidb-lite
280 313 34 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0000774
Molecular function Adenyl-nucleotide exchange factor activity Stimulates the hydrolysis and exchange of adenyl nucleotides by other proteins.
Subterm of
GO:0006457
Biological process Protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
Subterm of
GO:0042803
Molecular function Protein homodimerization activity Interacting selectively and non-covalently with an identical protein to form a homodimer.
Subterm of
GO:0051087
Molecular function Chaperone binding Interacting selectively and non-covalently with a chaperone protein, a class of proteins that bind to nascent or unfolded polypeptides and ensure correct folding or transport.
Subterm of

Genome browser

LORE1 insertions 21

Expression data

Expression pattern

Expression pattern of Lj0g3v0115109.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0115109.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.