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Lj0g3v0126899.1

Overview

Field Value
Gene ID Lj0g3v0126899
Transcript ID Lj0g3v0126899.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor bHLH62-like [Glycine max] gi|356566230|ref|XP_003551337.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR12565:SF99
42 387 346 1.30E-122 –
PANTHER
PTHR12565
42 387 346 1.30E-122 –
MobiDBLite
mobidb-lite
210 366 157 – –
CDD
cd00083
352 386 35 1.45E-04 –
SUPERFAMILY
SSF47459
352 386 35 2.22E-07
IPR011598
Gene3D
G3DSA:4.10.280.10
354 386 33 5.30E-07
IPR011598
ProSiteProfiles
PS50888
354 387 34 11.776
IPR011598

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions 7

Expression data

Expression pattern

Expression pattern of Lj0g3v0126899.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0126899.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.