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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011598
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 386 results. Now displaying 1 of 8 with 50 rows per page. This search has taken 7.793s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0003339.1
n.a. n.a. chr0 1222122 1223564 +
3 domain predictions
1 GO term
Lj0g3v0034169.1
n.a. PREDICTED: transcription factor bHLH18-like [Cicer arietinum] gi|502152675|ref|XP_004509038.1| chr0 10794006 10796954 +
6 domain predictions
1 GO term
Lj0g3v0056309.1
n.a. PREDICTED: transcription factor UNE12-like isoform X1 [Cicer arietinum] gi|502115201|ref|XP_004495148.1| chr0 18287246 18291406 +
6 domain predictions
1 GO term
Lj0g3v0063509.1
n.a. PREDICTED: transcription factor UNE10-like [Cucumis sativus] gi|449439645|ref|XP_004137596.1| chr0 21612783 21618192 -
6 domain predictions
1 GO term
Lj0g3v0068479.1
n.a. PREDICTED: transcription factor LHW-like isoform X1 [Cicer arietinum] gi|502083407|ref|XP_004487450.1| chr0 24494095 24501298 +
2 domain predictions
1 GO term
Lj0g3v0068479.2
n.a. PREDICTED: transcription factor LHW-like isoform X1 [Cicer arietinum] gi|502083407|ref|XP_004487450.1| chr0 24494365 24503712 +
2 domain predictions
1 GO term
Lj0g3v0069559.1
n.a. PREDICTED: transcription factor bHLH25-like [Glycine max] gi|356495527|ref|XP_003516628.1| chr0 25191319 25192897 +
6 domain predictions
1 GO term
Lj0g3v0084249.1
n.a. PREDICTED: transcription factor PIF4-like isoform X3 [Cicer arietinum] gi|502127041|ref|XP_004499540.1| chr0 33458612 33461733 +
6 domain predictions
1 GO term
Lj0g3v0096699.1
n.a. PREDICTED: transcription factor bHLH48-like [Glycine max] gi|356534621|ref|XP_003535851.1| chr0 40809051 40815602 -
6 domain predictions
1 GO term
Lj0g3v0099719.1
n.a. Transcription factor bHLH95 [Medicago truncatula] gi|357475297|ref|XP_003607934.1| chr0 42308382 42310496 -
6 domain predictions
1 GO term
Lj0g3v0105629.1
n.a. PREDICTED: transcription factor bHLH68-like isoform 1 [Glycine max] gi|356523767|ref|XP_003530506.1| chr0 45369687 45373493 +
4 domain predictions
1 GO term
Lj0g3v0121629.1
n.a. PREDICTED: transcription factor bHLH66-like [Cicer arietinum] gi|502149955|ref|XP_004507723.1| chr0 54271090 54274268 +
6 domain predictions
1 GO term
Lj0g3v0123959.1
n.a. PREDICTED: transcription factor bHLH135-like [Cicer arietinum] gi|502126770|ref|XP_004499430.1| chr0 55615951 55617657 -
5 domain predictions
1 GO term
Lj0g3v0126899.1
n.a. PREDICTED: transcription factor bHLH62-like [Glycine max] gi|356566230|ref|XP_003551337.1| chr0 57166532 57169387 +
4 domain predictions
1 GO term
Lj0g3v0126899.2
n.a. PREDICTED: transcription factor bHLH62-like [Glycine max] gi|356558973|ref|XP_003547776.1| chr0 57167412 57169387 +
6 domain predictions
1 GO term
Lj0g3v0131909.1
n.a. PREDICTED: transcription factor bHLH130-like [Glycine max] gi|356500459|ref|XP_003519049.1| chr0 60133333 60136706 -
6 domain predictions
1 GO term
Lj0g3v0134409.1
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356552929|ref|XP_003544814.1| chr0 61571730 61574413 -
6 domain predictions
1 GO term
Lj0g3v0167589.1
n.a. Transcription factor bHLH106 [Medicago truncatula] gi|357509333|ref|XP_003624955.1| chr0 79771167 79773173 -
6 domain predictions
1 GO term
Lj0g3v0173869.1
n.a. PREDICTED: transcription factor SPATULA-like isoform X1 [Cicer arietinum] gi|502125746|ref|XP_004499048.1| chr0 83766668 83769671 -
6 domain predictions
1 GO term
Lj0g3v0173869.2
n.a. PREDICTED: transcription factor SPATULA-like isoform X1 [Cicer arietinum] gi|502125746|ref|XP_004499048.1| chr0 83766668 83769671 -
6 domain predictions
1 GO term
Lj0g3v0177679.1
n.a. PREDICTED: transcription factor bHLH96-like [Glycine max] gi|356576765|ref|XP_003556500.1| chr0 86010436 86012474 +
6 domain predictions
1 GO term
Lj0g3v0186939.1
n.a. PREDICTED: transcription factor bHLH25-like [Cicer arietinum] gi|502174517|ref|XP_004515538.1| chr0 91170525 91174441 -
5 domain predictions
1 GO term
Lj0g3v0195439.1
n.a. PREDICTED: transcription factor bHLH130-like [Glycine max] gi|356504823|ref|XP_003521194.1| chr0 95360866 95364098 +
5 domain predictions
1 GO term
Lj0g3v0202299.1
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100143771 100145505 +
6 domain predictions
1 GO term
Lj0g3v0202329.1
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100153134 100154196 +
6 domain predictions
1 GO term
Lj0g3v0202379.2
n.a. PREDICTED: transcription factor ORG2-like [Glycine max] gi|356504732|ref|XP_003521149.1| chr0 100169037 100170677 +
6 domain predictions
1 GO term
Lj0g3v0212379.2
n.a. n.a. chr0 107163352 107166027 -
6 domain predictions
1 GO term
Lj0g3v0234069.1
n.a. PREDICTED: transcription factor bHLH110-like [Cicer arietinum] gi|502131451|ref|XP_004500989.1| chr0 121193598 121196395 -
4 domain predictions
1 GO term
Lj0g3v0234069.2
n.a. PREDICTED: transcription factor bHLH110-like [Cicer arietinum] gi|502131451|ref|XP_004500989.1| chr0 121193598 121196395 -
4 domain predictions
1 GO term
Lj0g3v0276629.1
n.a. Transcription factor SPATULA [Medicago truncatula] gi|357511583|ref|XP_003626080.1| chr0 143559773 143562164 -
6 domain predictions
1 GO term
Lj0g3v0282189.1
n.a. PREDICTED: transcription factor bHLH104-like [Glycine max] gi|356575261|ref|XP_003555760.1| chr0 146314508 146318680 +
6 domain predictions
1 GO term
Lj0g3v0282449.1
n.a. PREDICTED: transcription factor BEE 3-like [Glycine max] gi|356529573|ref|XP_003533364.1| chr0 146432844 146434852 -
6 domain predictions
1 GO term
Lj0g3v0283229.1
n.a. PREDICTED: transcription factor MYC2-like [Glycine max] gi|356502412|ref|XP_003520013.1| chr0 146799170 146799818 +
6 domain predictions
1 GO term
Lj0g3v0283609.1
n.a. PREDICTED: transcription factor bHLH123-like [Glycine max] gi|356542232|ref|XP_003539573.1| chr0 147022124 147025887 +
4 domain predictions
1 GO term
Lj0g3v0283609.2
n.a. PREDICTED: transcription factor bHLH123-like [Glycine max] gi|356542232|ref|XP_003539573.1| chr0 147022124 147025887 +
4 domain predictions
1 GO term
Lj0g3v0283609.3
n.a. PREDICTED: transcription factor bHLH123-like [Glycine max] gi|356542232|ref|XP_003539573.1| chr0 147022124 147025887 +
4 domain predictions
1 GO term
Lj0g3v0292969.1
n.a. PREDICTED: transcription factor bHLH25-like [Glycine max] gi|356521257|ref|XP_003529273.1| chr0 152045516 152047706 -
6 domain predictions
1 GO term
Lj0g3v0299319.1
n.a. PREDICTED: transcription factor bHLH93-like [Glycine max] gi|356552989|ref|XP_003544841.1| chr0 155542242 155544530 -
6 domain predictions
1 GO term
Lj0g3v0305759.1
n.a. PREDICTED: transcription factor bHLH91-like [Vitis vinifera] gi|359489179|ref|XP_002265098.2| chr0 159397309 159399197 -
6 domain predictions
1 GO term
Lj0g3v0307149.1
n.a. PREDICTED: transcription factor bHLH117-like [Cicer arietinum] gi|502083183|ref|XP_004487384.1| chr0 160347628 160348823 +
6 domain predictions
1 GO term
Lj0g3v0312929.1
n.a. PREDICTED: transcription factor bHLH25-like [Glycine max] gi|356522310|ref|XP_003529790.1| chr0 163397204 163401236 +
6 domain predictions
1 GO term
Lj0g3v0318189.1
n.a. PREDICTED: transcription factor PIF1-like [Glycine max] gi|356545930|ref|XP_003541386.1| chr0 166163297 166165647 -
6 domain predictions
1 GO term
Lj0g3v0336729.1
n.a. Transcription factor BEE [Medicago truncatula] gi|357440189|ref|XP_003590372.1| chr0 176378551 176382232 -
3 domain predictions
1 GO term
Lj0g3v0341529.1
n.a. PREDICTED: transcription factor bHLH123-like [Glycine max] gi|356546916|ref|XP_003541866.1| chr0 178975871 178979791 -
5 domain predictions
1 GO term
Lj0g3v0343449.1
n.a. PREDICTED: transcription factor MYC2-like [Cicer arietinum] gi|502154512|ref|XP_004509726.1| chr0 180040204 180042638 +
6 domain predictions
1 GO term
Lj0g3v0344429.2
n.a. Homeodomain-like superfamily protein isoform 2 [Theobroma cacao] gi|508699566|gb|EOX91462.1| chr0 180732717 180738512 -
6 domain predictions
1 GO term
Lj0g3v0347479.1
n.a. PREDICTED: transcription factor bHLH130-like [Glycine max] gi|356504823|ref|XP_003521194.1| chr0 182324513 182325668 +
6 domain predictions
1 GO term
Lj0g3v0359189.2
n.a. PREDICTED: transcription factor ILR3-like [Cicer arietinum] gi|502143701|ref|XP_004505433.1| chr0 189076608 189081628 -
6 domain predictions
1 GO term
Lj1g3v0183020.1
n.a. PREDICTED: transcription factor AIG1-like [Glycine max] gi|356498844|ref|XP_003518258.1| chr1 2122444 2123199 +
6 domain predictions
1 GO term
Lj1g3v0183020.2
n.a. PREDICTED: transcription factor AIG1-like [Glycine max] gi|356498844|ref|XP_003518258.1| chr1 2122444 2123199 +
5 domain predictions
1 GO term