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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0128429 |
| Transcript ID | Lj0g3v0128429.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: WAT1-related protein At4g08300-like isoform X1 [Cicer arietinum] gi|502130192|ref|XP_004500562.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 241 | 241 | 1.90E-152 | ||
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 1 | 241 | 241 | 1.90E-152 | – | |
| Phobius | 21 | 37 | 17 | – | – | |
| TMHMM | 21 | 43 | 23 | – | – | |
| Phobius | 38 | 67 | 30 | – | – | |
| Phobius | 68 | 88 | 21 | – | – | |
| TMHMM | 69 | 91 | 23 | – | – | |
| Pfam | 71 | 208 | 138 | 1.30E-09 | ||
| Phobius | 89 | 99 | 11 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 100 | 121 | 22 | – | – | |
| Phobius | 122 | 126 | 5 | – | – | |
| Phobius | 127 | 152 | 26 | – | – | |
| TMHMM | 130 | 152 | 23 | – | – | |
| SUPERFAMILY | 136 | 213 | 78 | 1.70E-09 | – | |
| Phobius | 153 | 163 | 11 | – | – | |
| TMHMM | 164 | 186 | 23 | – | – | |
| Phobius | 164 | 185 | 22 | – | – | |
| Phobius | 186 | 190 | 5 | – | – | |
| Phobius | 191 | 210 | 20 | – | – | |
| TMHMM | 191 | 210 | 20 | – | – | |
| Phobius | 211 | 261 | 51 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0128429.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0128429.1, powered by CORGI.
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