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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0202209 |
| Transcript ID | Lj0g3v0202209.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: metal-nicotianamine transporter YSL3-like [Glycine max] gi|356518659|ref|XP_003527996.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 320 | 320 | 1.20E-252 | – | |
| Phobius | 1 | 31 | 31 | – | – | |
| PANTHER | 1 | 320 | 320 | 1.20E-252 | – | |
| Pfam | 13 | 301 | 289 | 9.60E-64 | ||
| TIGRFAM | 24 | 298 | 275 | 6.20E-58 | ||
| Phobius | 32 | 55 | 24 | – | – | |
| TMHMM | 34 | 56 | 23 | – | – | |
| Phobius | 56 | 60 | 5 | – | – | |
| TMHMM | 61 | 83 | 23 | – | – | |
| Phobius | 61 | 82 | 22 | – | – | |
| Phobius | 83 | 88 | 6 | – | – | |
| Phobius | 89 | 105 | 17 | – | – | |
| Phobius | 106 | 110 | 5 | – | – | |
| Phobius | 111 | 128 | 18 | – | – | |
| Phobius | 129 | 148 | 20 | – | – | |
| TMHMM | 149 | 171 | 23 | – | – | |
| Phobius | 149 | 171 | 23 | – | – | |
| Phobius | 172 | 204 | 33 | – | – | |
| TMHMM | 204 | 226 | 23 | – | – | |
| Phobius | 205 | 226 | 22 | – | – | |
| Phobius | 227 | 245 | 19 | – | – | |
| TMHMM | 245 | 267 | 23 | – | – | |
| Phobius | 246 | 268 | 23 | – | – | |
| Phobius | 269 | 279 | 11 | – | – | |
| Phobius | 280 | 304 | 25 | – | – | |
| TMHMM | 282 | 304 | 23 | – | – | |
| Phobius | 305 | 327 | 23 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0202209.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0202209.2, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.