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Lj0g3v0203419.1

Overview

Field Value
Gene ID Lj0g3v0203419
Transcript ID Lj0g3v0203419.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: annexin-like protein RJ4-like [Cicer arietinum] gi|502158067|ref|XP_004511018.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10502:SF113
1 255 255 5.10E-158 –
PANTHER
PTHR10502
1 255 255 5.10E-158 –
SUPERFAMILY
SSF47874
3 254 252 1.13E-75 –
Gene3D
G3DSA:1.10.220.10
3 70 68 3.90E-22
IPR018502
Pfam
PF00191
15 76 62 1.20E-20
IPR018502
PRINTS
PR00196
19 40 22 4.10E-07
IPR001464
SMART
SM00335
27 79 53 8.60E-18
IPR018502
Gene3D
G3DSA:1.10.220.10
71 151 81 1.60E-14
IPR018502
Pfam
PF00191
96 150 55 2.90E-10
IPR018502
SMART
SM00335
98 150 53 7.80E-12
IPR018502
PRINTS
PR01814
117 131 15 5.90E-12
IPR009118
PRINTS
PR01814
159 179 21 5.90E-12
IPR009118
Gene3D
G3DSA:1.10.220.10
165 234 70 4.40E-14
IPR018502
Pfam
PF00191
169 230 62 1.50E-12
IPR018502
PRINTS
PR00196
177 197 21 4.10E-07
IPR001464
SMART
SM00335
182 233 52 0.032
IPR018502
PRINTS
PR00196
221 234 14 4.10E-07
IPR001464
PRINTS
PR01814
224 242 19 5.90E-12
IPR009118

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0005544
Molecular function Calcium-dependent phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
Subterm of

Genome browser

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj0g3v0203419.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0203419.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.