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Lj0g3v0206699.2

Overview

Field Value
Gene ID Lj0g3v0206699
Transcript ID Lj0g3v0206699.2
Related isoforms 3
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: ABC transporter C family member 12-like [Glycine max] gi|356517706|ref|XP_003527527.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 27 27
PANTHER 10 306 297 3.60E-150
PANTHER 10 306 297 3.60E-150
Phobius 28 51 24
TMHMM 36 58 23
Phobius 52 71 20
TMHMM 71 93 23
Phobius 72 90 19
Phobius 91 109 19
TMHMM 108 130 23
Phobius 110 130 21
Phobius 131 141 11
Phobius 142 162 21
TMHMM 142 164 23
Phobius 163 173 11
TMHMM 174 196 23
Phobius 174 195 22
Phobius 196 307 112

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0206699.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0206699.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.