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Lj0g3v0212309.1

Overview

Field Value
Gene ID Lj0g3v0212309
Transcript ID Lj0g3v0212309.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: proliferating cell nuclear antigen-like [Cicer arietinum] gi|502129176|ref|XP_004500211.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
CDD
cd00577
1 188 188 2.90E-70 –
SUPERFAMILY
SSF55979
1 59 59 1.57E-15 –
Pfam
PF00705
1 58 58 6.10E-19
IPR022648
Gene3D
G3DSA:3.70.10.10
1 193 193 8.40E-87 –
PANTHER
PTHR11352
1 198 198 5.00E-131
IPR000730
TIGRFAM
TIGR00590
1 192 192 4.00E-91
IPR000730
PRINTS
PR00339
43 65 23 1.70E-30
IPR000730
Pfam
PF02747
60 187 128 1.10E-61
IPR022649
SUPERFAMILY
SSF55979
60 188 129 5.34E-45 –
PRINTS
PR00339
136 150 15 1.70E-30
IPR000730
PRINTS
PR00339
174 191 18 1.70E-30
IPR000730

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0006275
Biological process Regulation of DNA replication Any process that modulates the frequency, rate or extent of DNA replication.
Subterm of
Regulates
GO:0030337
Molecular function DNA polymerase processivity factor activity An enzyme regulator activity that increases the processivity of polymerization by DNA polymerase, by allowing the polymerase to move rapidly along DNA while remaining topologically bound to it.
Subterm of

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj0g3v0212309.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0212309.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.