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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0216769 |
| Transcript ID | Lj0g3v0216769.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L3-like [Cicer arietinum] gi|502152490|ref|XP_004508949.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 227 | 227 | 1.30E-127 | ||
| Gene3D | 7 | 227 | 221 | 3.50E-77 | ||
| SUPERFAMILY | 8 | 227 | 220 | 1.08E-73 | – | |
| CDD | 10 | 225 | 216 | 2.55E-109 | – | |
| Pfam | 10 | 211 | 202 | 2.30E-59 | ||
| PRINTS | 12 | 29 | 18 | 3.40E-29 | ||
| PRINTS | 50 | 62 | 13 | 3.40E-29 | ||
| PRINTS | 90 | 107 | 18 | 3.40E-29 | ||
| PRINTS | 162 | 173 | 12 | 3.40E-29 | ||
| PRINTS | 178 | 188 | 11 | 3.40E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Thiol-dependent ubiquitin-specific protease activity | Catalysis of the thiol-dependent hydrolysis of a peptide bond formed by the C-terminal glycine of ubiquitin and another protein. | ||
| Biological process | Ubiquitin-dependent protein catabolic process | The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein. |
Expression pattern of Lj0g3v0216769.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0216769.1, powered by CORGI.
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