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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0220219 |
| Transcript ID | Lj0g3v0220219.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | peroxidase precursor [Glycine max] gi|363814589|ref|NP_001242769.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 166 | 166 | 5.00E-86 | – | |
| PANTHER | 1 | 166 | 166 | 5.00E-86 | – | |
| Phobius | 1 | 10 | 10 | – | – | |
| Phobius | 1 | 30 | 30 | – | – | |
| SignalP | 1 | 30 | 30 | – | – | |
| TMHMM | 5 | 27 | 23 | – | – | |
| Phobius | 11 | 26 | 16 | – | – | |
| Phobius | 27 | 30 | 4 | – | – | |
| Phobius | 31 | 166 | 136 | – | – | |
| SUPERFAMILY | 35 | 163 | 129 | 9.87E-43 | ||
| ProSiteProfiles | 39 | 166 | 128 | 35.039 | ||
| Gene3D | 40 | 162 | 123 | 1.70E-44 | – | |
| PRINTS | 49 | 68 | 20 | 6.30E-26 | ||
| Pfam | 56 | 163 | 108 | 4.00E-33 | ||
| ProSitePatterns | 71 | 82 | 12 | – | ||
| PRINTS | 71 | 85 | 15 | 1.00E-16 | ||
| PRINTS | 73 | 93 | 21 | 6.30E-26 | ||
| PRINTS | 111 | 124 | 14 | 6.30E-26 | ||
| PRINTS | 130 | 140 | 11 | 6.30E-26 | ||
| PRINTS | 131 | 148 | 18 | 1.00E-16 | ||
| PRINTS | 149 | 161 | 13 | 1.00E-16 | ||
| PRINTS | 149 | 164 | 16 | 6.30E-26 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0220219.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0220219.2, powered by CORGI.
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