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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0233429 |
| Transcript ID | Lj0g3v0233429.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | calmodulin [Glycine max] gi|351721559|ref|NP_001238237.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 136 | 136 | 6.70E-113 | – | |
| PANTHER | 1 | 136 | 136 | 6.70E-113 | – | |
| SUPERFAMILY | 2 | 136 | 135 | 5.33E-51 | ||
| Gene3D | 3 | 72 | 70 | 1.90E-42 | ||
| ProSiteProfiles | 8 | 43 | 36 | 16.801 | ||
| SMART | 12 | 40 | 29 | 6.90E-08 | ||
| CDD | 12 | 74 | 63 | 2.25E-20 | ||
| Pfam | 12 | 73 | 62 | 2.40E-15 | ||
| ProSitePatterns | 21 | 33 | 13 | – | ||
| ProSiteProfiles | 44 | 79 | 36 | 14.541 | ||
| SMART | 48 | 76 | 29 | 2.50E-08 | ||
| ProSitePatterns | 57 | 69 | 13 | – | ||
| Gene3D | 73 | 136 | 64 | 1.00E-28 | ||
| ProSiteProfiles | 81 | 116 | 36 | 17.554 | ||
| Pfam | 83 | 135 | 53 | 6.20E-13 | ||
| CDD | 85 | 136 | 52 | 8.39E-17 | ||
| SMART | 85 | 113 | 29 | 3.10E-08 | ||
| ProSitePatterns | 94 | 106 | 13 | – | ||
| ProSiteProfiles | 117 | 136 | 20 | 10.58 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj0g3v0233429.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0233429.3, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.