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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0238399 |
| Transcript ID | Lj0g3v0238399.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: probable aquaporin SIP1-2-like [Glycine max] gi|356559530|ref|XP_003548052.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 126 | 126 | 1.00E-23 | – | |
| PANTHER | 1 | 126 | 126 | 1.00E-23 | ||
| Phobius | 1 | 11 | 11 | – | – | |
| SUPERFAMILY | 3 | 124 | 122 | 7.46E-09 | ||
| Gene3D | 4 | 122 | 119 | 2.30E-05 | ||
| TMHMM | 12 | 31 | 20 | – | – | |
| Phobius | 12 | 30 | 19 | – | – | |
| Phobius | 31 | 50 | 20 | – | – | |
| Phobius | 51 | 72 | 22 | – | – | |
| TMHMM | 51 | 73 | 23 | – | – | |
| Phobius | 73 | 101 | 29 | – | – | |
| Phobius | 102 | 120 | 19 | – | – | |
| Phobius | 121 | 126 | 6 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0238399.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0238399.1, powered by CORGI.
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