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Lj0g3v0244999.1

Overview

Field	Value
Gene ID	Lj0g3v0244999
Transcript ID	Lj0g3v0244999.1
Lotus japonicus genome version	MG20 v3.0
Description	Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi\|358346377\|ref\|XP_003637245.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
ProSiteProfiles	PS51473 View details on PS51473 Search for proteins/transripts with this domain View external data on PS51473	51	157	107	14.968	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
PANTHER	PTHR32099:SF1 View details on PTHR32099:SF1 Search for proteins/transripts with this domain View external data on PTHR32099:SF1	77	295	219	8.80E-79	–
PANTHER	PTHR32099 View details on PTHR32099 Search for proteins/transripts with this domain View external data on PTHR32099	77	295	219	8.80E-79	–
Pfam	PF01657 View details on PF01657 Search for proteins/transripts with this domain View external data on PF01657	77	154	78	4.60E-14	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
ProSiteProfiles	PS51473 View details on PS51473 Search for proteins/transripts with this domain View external data on PS51473	163	271	109	20.807	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF01657 View details on PF01657 Search for proteins/transripts with this domain View external data on PF01657	177	268	92	7.40E-11	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
ProSiteProfiles	PS51473 View details on PS51473 Search for proteins/transripts with this domain View external data on PS51473	298	397	100	18.453	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF01657 View details on PF01657 Search for proteins/transripts with this domain View external data on PF01657	304	394	91	1.20E-19	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
ProSiteProfiles	PS51473 View details on PS51473 Search for proteins/transripts with this domain View external data on PS51473	408	514	107	14.941	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF01657 View details on PF01657 Search for proteins/transripts with this domain View external data on PF01657	433	510	78	4.70E-07	IPR002902 Show description in modal box View details on IPR002902 Search for proteins/transripts with this domain View on EBI InterPro Service

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

Unable to find any GO terms for the transcript with the identifier.

Genome browser

LORE1 insertions 4

Expression data

Expression pattern

Expression pattern of Lj0g3v0244999.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0244999.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.