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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR002902
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 140 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 5.966s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0027059.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356537750|ref|XP_003537388.1| chr0 9973110 9974915 +
3 domain predictions
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Lj0g3v0096479.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347873|ref|XP_003637975.1| chr0 40687117 40695302 +
3 domain predictions
 –
Lj0g3v0096499.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358347950|ref|XP_003638013.1| chr0 40697605 40697967 +
3 domain predictions
 –
Lj0g3v0100929.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max] gi|356548095|ref|XP_003542439.1| chr0 42723393 42724283 -
3 domain predictions
 –
Lj0g3v0113159.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356575757|ref|XP_003556003.1| chr0 49397392 49401058 -
3 domain predictions
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Lj0g3v0113169.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 49402115 49406125 -
3 domain predictions
 –
Lj0g3v0113169.2
n.a. PREDICTED: LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 15-like [Glycine max] gi|356574376|ref|XP_003555324.1| chr0 49402115 49406125 -
3 domain predictions
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Lj0g3v0120279.1
n.a. PREDICTED: LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 15-like [Glycine max] gi|356574376|ref|XP_003555324.1| chr0 53440666 53442097 +
3 domain predictions
 –
Lj0g3v0155449.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356567656|ref|XP_003552033.1| chr0 72887444 72891571 +
3 domain predictions
 –
Lj0g3v0191879.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356575757|ref|XP_003556003.1| chr0 93766675 93770342 -
3 domain predictions
 –
Lj0g3v0191889.2
n.a. PREDICTED: LOW QUALITY PROTEIN: cysteine-rich receptor-like protein kinase 15-like [Glycine max] gi|356574376|ref|XP_003555324.1| chr0 93771399 93775451 -
3 domain predictions
 –
Lj0g3v0196469.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 3-like [Glycine max] gi|356533655|ref|XP_003535376.1| chr0 95790681 95792836 -
3 domain predictions
 –
Lj0g3v0213099.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 3 [Glycine max] gi|356575771|ref|XP_003556010.1| chr0 107537597 107539047 +
3 domain predictions
 –
Lj0g3v0213099.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like isoform 1 [Glycine max] gi|356575767|ref|XP_003556008.1| chr0 107537597 107539047 +
3 domain predictions
 –
Lj0g3v0244999.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358346377|ref|XP_003637245.1| chr0 127034355 127038203 +
3 domain predictions
 –
Lj0g3v0245009.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 6-like [Glycine max] gi|356529332|ref|XP_003533249.1| chr0 127034652 127039161 +
3 domain predictions
 –
Lj0g3v0250199.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356574368|ref|XP_003555320.1| chr0 129693879 129697385 +
3 domain predictions
 –
Lj0g3v0270179.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|358346377|ref|XP_003637245.1| chr0 139980217 139982669 +
3 domain predictions
 –
Lj0g3v0294609.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 55-like [Cicer arietinum] gi|502103126|ref|XP_004492208.1| chr0 153112492 153113439 +
3 domain predictions
 –
Lj0g3v0304949.1
n.a. n.a. chr0 158882303 158887106 +
3 domain predictions
 –
Lj0g3v0304959.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356559907|ref|XP_003548237.1| chr0 158883519 158887347 -
3 domain predictions
 –
Lj0g3v0304989.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356561745|ref|XP_003549139.1| chr0 158893606 158894376 -
3 domain predictions
 –
Lj0g3v0321459.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357490335|ref|XP_003615455.1| chr0 167846404 167849163 -
3 domain predictions
 –
Lj0g3v0332859.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356561745|ref|XP_003549139.1| chr0 174179790 174183934 +
3 domain predictions
 –
Lj0g3v0351729.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127648|ref|XP_004499785.1| chr0 184940717 184947979 +
3 domain predictions
 –
Lj0g3v0351749.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184948753 184953497 -
3 domain predictions
 –
Lj0g3v0351749.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127646|ref|XP_004499784.1| chr0 184950991 184953497 -
3 domain predictions
 –
Lj1g3v0052330.1
n.a. cysteine-rich protein precursor [Glycine max] gi|351721533|ref|NP_001238492.1| chr1 448340 451345 -
3 domain predictions
 –
Lj1g3v0052350.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480737|ref|XP_003610654.1| chr1 454027 457186 -
3 domain predictions
 –
Lj1g3v0052360.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357480739|ref|XP_003610655.1| chr1 459111 462277 -
3 domain predictions
 –
Lj1g3v3593850.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 55-like [Glycine max] gi|356566120|ref|XP_003551283.1| chr1 41267933 41268718 -
3 domain predictions
 –
Lj1g3v3645340.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 42-like [Glycine max] gi|356573847|ref|XP_003555067.1| chr1 42048452 42052230 +
3 domain predictions
 –
Lj1g3v4516160.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 56-like [Glycine max] gi|356505058|ref|XP_003521309.1| chr1 53234917 53236864 +
3 domain predictions
 –
Lj2g3v1415230.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 2-like [Glycine max] gi|356497745|ref|XP_003517719.1| chr2 22351595 22361571 -
3 domain predictions
 –
Lj2g3v1415240.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356502033|ref|XP_003519826.1| chr2 22362443 22365172 -
3 domain predictions
 –
Lj2g3v2173040.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357490335|ref|XP_003615455.1| chr2 32641006 32644973 +
3 domain predictions
 –
Lj2g3v2173040.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357490335|ref|XP_003615455.1| chr2 32641050 32659544 +
3 domain predictions
 –
Lj2g3v2555890.1
n.a. Cysteine-rich repeat secretory protein [Medicago truncatula] gi|357491961|ref|XP_003616268.1| chr2 35201138 35206730 +
3 domain predictions
 –
Lj2g3v2555900.1
n.a. n.a. chr2 35201138 35206730 -
3 domain predictions
 –
Lj3g3v1342650.1
n.a. Cysteine-rich repeat secretory protein [Medicago truncatula] gi|357453525|ref|XP_003597040.1| chr3 17411793 17413249 -
3 domain predictions
 –
Lj3g3v1353730.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 38-like [Glycine max] gi|356547061|ref|XP_003541936.1| chr3 17433386 17434111 -
3 domain predictions
 –
Lj3g3v1354750.1
n.a. Cysteine-rich repeat secretory protein [Medicago truncatula] gi|357453525|ref|XP_003597040.1| chr3 17445741 17446439 +
3 domain predictions
 –
Lj3g3v1476880.1
n.a. PREDICTED: cysteine-rich repeat secretory protein 15-like [Glycine max] gi|356537647|ref|XP_003537337.1| chr3 18869556 18872572 -
3 domain predictions
 –
Lj3g3v1855390.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X3 [Cicer arietinum] gi|502158354|ref|XP_004511117.1| chr3 23637901 23641007 +
3 domain predictions
 –
Lj3g3v1855390.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like isoform X2 [Cicer arietinum] gi|502158352|ref|XP_004511116.1| chr3 23637901 23641007 +
3 domain predictions
 –
Lj3g3v1855400.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Glycine max] gi|356554939|ref|XP_003545798.1| chr3 23642415 23643525 +
3 domain predictions
 –
Lj3g3v3212160.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Cicer arietinum] gi|502119939|ref|XP_004496791.1| chr3 39613986 39615658 -
2 domain predictions
 –
Lj3g3v3337510.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 10-like [Cicer arietinum] gi|502127648|ref|XP_004499785.1| chr3 40746139 40751642 +
3 domain predictions
 –
Lj4g3v1085080.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356567656|ref|XP_003552033.1| chr4 15752777 15755579 -
3 domain predictions
 –
Lj4g3v1089140.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 3-like [Glycine max] gi|356567656|ref|XP_003552033.1| chr4 15790307 15794848 +
3 domain predictions
 –