Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0247659.1

Overview

Field Value
Gene ID Lj0g3v0247659
Transcript ID Lj0g3v0247659.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: serpin-ZX [Vitis vinifera] gi|359492076|ref|XP_002284126.2|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00093
1 303 303 9.00E-36
IPR023796
Gene3D
G3DSA:3.30.497.10
11 88 78 1.80E-36 –
SUPERFAMILY
SSF56574
12 303 292 1.24E-76
IPR023796
Pfam
PF00079
15 303 289 1.80E-67
IPR023796
PANTHER
PTHR11461:SF171
18 307 290 6.50E-135 –
PANTHER
PTHR11461
18 307 290 6.50E-135
IPR000215
Gene3D
G3DSA:2.30.39.10
89 196 108 1.50E-38 –
Gene3D
G3DSA:3.30.497.10
197 253 57 1.80E-36 –
Gene3D
G3DSA:2.30.39.10
254 303 50 1.50E-38 –
ProSitePatterns
PS00284
276 286 11 –
IPR023795
MobiDBLite
mobidb-lite
323 356 34 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005615
Cellular component Extracellular space That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid.
Subterm of

Genome browser

LORE1 insertions 5

Expression data

Expression pattern

Expression pattern of Lj0g3v0247659.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0247659.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.