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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023795
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 76 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 7.155s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0079539.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 30762713 30764318 +
2 domain predictions
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Lj0g3v0082859.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 32619066 32621614 +
2 domain predictions
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Lj0g3v0161709.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 76100846 76105728 -
2 domain predictions
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Lj0g3v0219369.1
n.a. Serpin-ZX [Medicago truncatula] gi|357465409|ref|XP_003602989.1| chr0 112075180 112076263 +
2 domain predictions
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Lj0g3v0247649.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 128389986 128391735 +
2 domain predictions
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Lj0g3v0247659.1
n.a. PREDICTED: serpin-ZX [Vitis vinifera] gi|359492076|ref|XP_002284126.2| chr0 128400721 128402085 +
2 domain predictions
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Lj0g3v0265879.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 137721619 137725083 +
2 domain predictions
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Lj0g3v0267649.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 138686028 138689048 +
2 domain predictions
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Lj0g3v0281449.1
n.a. n.a. chr0 145900370 145907142 -
2 domain predictions
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Lj0g3v0281459.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 145901127 145907142 +
2 domain predictions
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Lj0g3v0281459.2
n.a. Serpin [Medicago truncatula] gi|357465379|ref|XP_003602971.1| chr0 145904519 145907142 +
2 domain predictions
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Lj0g3v0283759.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 147126038 147128319 +
2 domain predictions
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Lj0g3v0283769.1
n.a. Serine protease inhibitor (SERPIN) family protein [Theobroma cacao] gi|508722701|gb|EOY14598.1| chr0 147131107 147131685 +
2 domain predictions
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Lj0g3v0286079.1
n.a. Serpin-ZX [Medicago truncatula] gi|357456725|ref|XP_003598643.1| chr0 148572640 148575314 -
2 domain predictions
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Lj0g3v0322379.1
n.a. PREDICTED: serpin-ZX-like [Fragaria vesca subsp]. vesca] gi|470111396|ref|XP_004291934.1| chr0 168372098 168373868 -
2 domain predictions
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Lj0g3v0329349.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr0 172185384 172187052 -
2 domain predictions
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Lj1g3v0364130.1
n.a. Serine protease inhibitor (SERPIN) family protein [Theobroma cacao] gi|508722701|gb|EOY14598.1| chr1 4150847 4151606 -
2 domain predictions
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Lj1g3v1147600.1
n.a. PREDICTED: serpin-ZX-like [Fragaria vesca subsp]. vesca] gi|470111396|ref|XP_004291934.1| chr1 14238374 14239706 +
2 domain predictions
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Lj1g3v1638590.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr1 19404265 19405974 +
2 domain predictions
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Lj1g3v2809500.1
n.a. Serpin-ZX [Medicago truncatula] gi|357504789|ref|XP_003622683.1| chr1 32066424 32068442 +
2 domain predictions
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Lj1g3v3368880.1
n.a. Serine protease inhibitor (SERPIN) family protein [Theobroma cacao] gi|508722701|gb|EOY14598.1| chr1 38640864 38643384 -
2 domain predictions
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Lj2g3v0635770.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr2 9882583 9885405 -
2 domain predictions
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Lj2g3v0635770.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr2 9882583 9885405 -
2 domain predictions
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Lj2g3v0636030.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356519136|ref|XP_003528230.1| chr2 9974266 9976495 -
2 domain predictions
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Lj2g3v0636140.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr2 10021410 10024096 -
2 domain predictions
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Lj2g3v0917230.1
n.a. PREDICTED: serpin-ZX-like [Fragaria vesca subsp]. vesca] gi|470111396|ref|XP_004291934.1| chr2 14525395 14527267 +
2 domain predictions
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Lj2g3v0917280.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr2 14537339 14539389 +
2 domain predictions
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Lj3g3v3475780.1
n.a. n.a. chr3 42402880 42403396 +
2 domain predictions
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Lj4g3v2174000.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 30028826 30030678 +
2 domain predictions
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Lj4g3v2253600.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 31283331 31285863 -
2 domain predictions
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Lj4g3v2253610.1
n.a. Serpin-ZX [Medicago truncatula] gi|357465403|ref|XP_003602986.1| chr4 31289228 31290024 -
2 domain predictions
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Lj4g3v2253770.1
n.a. Serpin-ZX [Medicago truncatula] gi|357504789|ref|XP_003622683.1| chr4 31322041 31323857 -
2 domain predictions
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Lj4g3v2253780.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 31326571 31329349 -
2 domain predictions
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Lj4g3v2253780.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 31326571 31329349 -
2 domain predictions
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Lj4g3v2337940.1
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 32413857 32415101 +
2 domain predictions
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Lj4g3v2882060.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr4 38510372 38513426 -
2 domain predictions
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Lj4g3v3014170.1
n.a. PREDICTED: serpin-ZX-like [Fragaria vesca subsp]. vesca] gi|470111396|ref|XP_004291934.1| chr4 39951484 39952329 +
2 domain predictions
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Lj5g3v0746880.1
n.a. PREDICTED: disease resistance response protein 206-like [Cicer arietinum] gi|502167510|ref|XP_004514163.1| chr5 10838860 10839930 +
2 domain predictions
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Lj5g3v2179750.1
n.a. n.a. chr5 31287113 31310219 -
2 domain predictions
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Lj6g3v2079220.1
n.a. Serpin-ZX [Medicago truncatula] gi|357465403|ref|XP_003602986.1| chr6 24451460 24452844 +
2 domain predictions
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Lj6g3v2232270.1
n.a. PREDICTED: serpin-ZX-like [Cucumis sativus] gi|449470170|ref|XP_004152791.1| chr6 26009766 26012869 +
2 domain predictions
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Lj6g3v2232270.2
n.a. PREDICTED: serpin-ZX-like [Glycine max] gi|356510338|ref|XP_003523896.1| chr6 26009766 26012869 +
2 domain predictions
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LotjaGi1g1v0187100.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0187100 LjG1.1_chr1 36637040 36639165 -
2 domain predictions
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LotjaGi1g1v0349300.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q40066|SPZX_HORVU Serpin-ZX; TrEMBL-Plants: tr|A0A061FCG1|A0A061FCG1_THECC Serine protease inhibitor (SERPIN) family protein; Found in the gene: LotjaGi1g1v0349300 LjG1.1_chr1 81903335 81905149 +
2 domain predictions
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LotjaGi1g1v0349300.2
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0349300 LjG1.1_chr1 81903380 81905167 +
2 domain predictions
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LotjaGi1g1v0350600.1
n.a. Serpin-like protein; TAIR: AT1G47710.2 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0350600 LjG1.1_chr1 82159584 82167398 +
2 domain predictions
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LotjaGi1g1v0350800.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0350800 LjG1.1_chr1 82170319 82173709 +
2 domain predictions
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LotjaGi1g1v0351400.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0351400 LjG1.1_chr1 82271867 82273980 -
2 domain predictions
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LotjaGi1g1v0351700.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I1JTG3|I1JTG3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0351700 LjG1.1_chr1 82316743 82318463 -
2 domain predictions
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LotjaGi1g1v0626400.1
n.a. Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q40066|SPZX_HORVU Serpin-ZX; TrEMBL-Plants: tr|I3S0S8|I3S0S8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0626400 LjG1.1_chr1 117494419 117496885 -
2 domain predictions
 –