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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0250669 |
| Transcript ID | Lj0g3v0250669.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: calcium-binding protein CML38-like [Cicer arietinum] gi|502130435|ref|XP_004500649.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 147 | 142 | 2.70E-58 | – | |
| PANTHER | 6 | 147 | 142 | 2.70E-58 | – | |
| ProSiteProfiles | 8 | 43 | 36 | 12.979 | ||
| Gene3D | 10 | 146 | 137 | 1.80E-38 | ||
| SUPERFAMILY | 10 | 146 | 137 | 6.07E-38 | ||
| SMART | 12 | 40 | 29 | 0.024 | ||
| CDD | 13 | 73 | 61 | 7.34E-11 | ||
| Pfam | 17 | 74 | 58 | 3.90E-09 | ||
| ProSitePatterns | 21 | 33 | 13 | – | ||
| ProSiteProfiles | 44 | 79 | 36 | 9.688 | ||
| SMART | 48 | 76 | 29 | 0.31 | ||
| ProSitePatterns | 57 | 69 | 13 | – | ||
| ProSiteProfiles | 81 | 116 | 36 | 15.211 | ||
| Pfam | 84 | 147 | 64 | 1.40E-15 | ||
| SMART | 85 | 113 | 29 | 1.90E-06 | ||
| CDD | 85 | 147 | 63 | 2.06E-17 | ||
| ProSiteProfiles | 117 | 147 | 31 | 15.322 | ||
| SMART | 121 | 147 | 27 | 0.016 | ||
| ProSitePatterns | 130 | 142 | 13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). |
Expression pattern of Lj0g3v0250669.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0250669.1, powered by CORGI.
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