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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0252239 |
| Transcript ID | Lj0g3v0252239.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Tonoplast dicarboxylate transporter [Medicago truncatula] gi|357447929|ref|XP_003594240.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 39 | 39 | – | – | |
| PANTHER | 4 | 26 | 23 | 2.10E-121 | – | |
| PANTHER | 4 | 26 | 23 | 2.10E-121 | – | |
| TMHMM | 37 | 59 | 23 | – | – | |
| Phobius | 40 | 59 | 20 | – | – | |
| Pfam | 52 | 318 | 267 | 1.10E-37 | ||
| Phobius | 60 | 70 | 11 | – | – | |
| PANTHER | 65 | 319 | 255 | 2.10E-121 | – | |
| PANTHER | 65 | 319 | 255 | 2.10E-121 | – | |
| Phobius | 71 | 91 | 21 | – | – | |
| TMHMM | 74 | 106 | 33 | – | – | |
| Phobius | 92 | 110 | 19 | – | – | |
| Phobius | 111 | 133 | 23 | – | – | |
| TMHMM | 119 | 138 | 20 | – | – | |
| Phobius | 134 | 141 | 8 | – | – | |
| Phobius | 142 | 162 | 21 | – | – | |
| TMHMM | 158 | 180 | 23 | – | – | |
| Phobius | 163 | 173 | 11 | – | – | |
| Phobius | 174 | 192 | 19 | – | – | |
| Phobius | 193 | 211 | 19 | – | – | |
| Phobius | 212 | 236 | 25 | – | – | |
| TMHMM | 216 | 238 | 23 | – | – | |
| Phobius | 237 | 255 | 19 | – | – | |
| Phobius | 256 | 280 | 25 | – | – | |
| TMHMM | 258 | 280 | 23 | – | – | |
| Phobius | 281 | 323 | 43 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0252239.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0252239.1, powered by CORGI.
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