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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0254089 |
| Transcript ID | Lj0g3v0254089.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: TVP38/TMEM64 family membrane protein slr0305-like [Glycine max] gi|356513717|ref|XP_003525557.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 49 | 49 | – | – | |
| Phobius | 50 | 69 | 20 | – | – | |
| TMHMM | 51 | 70 | 20 | – | – | |
| PANTHER | 51 | 282 | 232 | 3.10E-155 | ||
| PANTHER | 51 | 282 | 232 | 3.10E-155 | – | |
| Phobius | 70 | 88 | 19 | – | – | |
| TMHMM | 85 | 107 | 23 | – | – | |
| Phobius | 89 | 107 | 19 | – | – | |
| Pfam | 106 | 226 | 121 | 1.40E-16 | ||
| Phobius | 108 | 118 | 11 | – | – | |
| Phobius | 119 | 142 | 24 | – | – | |
| TMHMM | 120 | 142 | 23 | – | – | |
| Phobius | 143 | 205 | 63 | – | – | |
| TMHMM | 179 | 201 | 23 | – | – | |
| Phobius | 206 | 226 | 21 | – | – | |
| TMHMM | 206 | 228 | 23 | – | – | |
| Phobius | 227 | 245 | 19 | – | – | |
| TMHMM | 243 | 265 | 23 | – | – | |
| Phobius | 246 | 267 | 22 | – | – | |
| Phobius | 268 | 284 | 17 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0254089.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0254089.1, powered by CORGI.
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