Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0261759.2

Overview

Field Value
Gene ID Lj0g3v0261759
Transcript ID Lj0g3v0261759.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: lipid phosphate phosphatase 2-like [Glycine max] gi|356530711|ref|XP_003533924.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
PANTHER 1 197 197 3.40E-133
PANTHER 1 197 197 3.40E-133
SUPERFAMILY 3 170 168 5.63E-37
CDD 3 165 163 7.37E-81
Gene3D 4 163 160 4.70E-28
SMART 19 162 144 1.10E-22
Phobius 20 38 19
TMHMM 21 38 18
Pfam 21 166 146 6.60E-31
Phobius 39 87 49
TMHMM 84 103 20
Phobius 88 104 17
Phobius 105 115 11
TMHMM 115 137 23
Phobius 116 135 20
Phobius 136 146 11
TMHMM 147 166 20
Phobius 147 165 19
Phobius 166 225 60

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of Lj0g3v0261759.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0261759.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.