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Lj0g3v0261939.2

Overview

Field Value
Gene ID Lj0g3v0261939
Transcript ID Lj0g3v0261939.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: annexin-like protein RJ4-like [Glycine max] gi|356508416|ref|XP_003522953.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10502
1 217 217 1.20E-137 –
PANTHER
PTHR10502:SF113
1 217 217 1.20E-137 –
SUPERFAMILY
SSF47874
3 217 215 7.46E-67 –
Gene3D
G3DSA:1.10.220.10
3 71 69 4.20E-19
IPR018502
Pfam
PF00191
15 76 62 3.40E-17
IPR018502
PRINTS
PR00196
24 46 23 5.80E-09
IPR001464
SMART
SM00335
27 79 53 1.80E-10
IPR018502
PRINTS
PR00196
64 80 17 5.80E-09
IPR001464
Gene3D
G3DSA:1.10.220.10
72 152 81 1.40E-16
IPR018502
Pfam
PF00191
90 151 62 3.30E-11
IPR018502
PRINTS
PR00196
91 112 22 5.80E-09
IPR001464
SMART
SM00335
99 151 53 8.40E-11
IPR018502
PRINTS
PR01814
118 132 15 2.60E-10
IPR009118
PRINTS
PR01814
160 180 21 2.60E-10
IPR009118
Gene3D
G3DSA:1.10.220.10
167 216 50 2.60E-10
IPR018502
Pfam
PF00191
170 217 48 7.60E-10
IPR018502
PRINTS
PR00196
173 199 27 5.80E-09
IPR001464

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005509
Molecular function Calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
Subterm of
GO:0005544
Molecular function Calcium-dependent phospholipid binding Interacting selectively and non-covalently with phospholipids, a class of lipids containing phosphoric acid as a mono- or diester, in the presence of calcium.
Subterm of

Genome browser

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj0g3v0261939.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0261939.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.