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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0264169 |
| Transcript ID | Lj0g3v0264169.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | GPI-anchored wall transfer protein [Medicago truncatula] gi|357517003|ref|XP_003628790.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 212 | 212 | 1.10E-99 | ||
| Phobius | 1 | 6 | 6 | – | – | |
| Phobius | 7 | 29 | 23 | – | – | |
| TMHMM | 7 | 29 | 23 | – | – | |
| Phobius | 30 | 48 | 19 | – | – | |
| TMHMM | 49 | 71 | 23 | – | – | |
| Phobius | 49 | 69 | 21 | – | – | |
| Phobius | 70 | 80 | 11 | – | – | |
| Phobius | 81 | 101 | 21 | – | – | |
| Phobius | 102 | 112 | 11 | – | – | |
| TMHMM | 111 | 133 | 23 | – | – | |
| Phobius | 113 | 134 | 22 | – | – | |
| Phobius | 135 | 145 | 11 | – | – | |
| Phobius | 146 | 166 | 21 | – | – | |
| TMHMM | 148 | 167 | 20 | – | – | |
| Phobius | 167 | 171 | 5 | – | – | |
| TMHMM | 172 | 189 | 18 | – | – | |
| Phobius | 172 | 192 | 21 | – | – | |
| Phobius | 193 | 212 | 20 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | GPI anchor biosynthetic process | The chemical reactions and pathways resulting in the formation of a glycosylphosphatidylinositol (GPI) anchor that attaches some membrane proteins to the lipid bilayer of the cell membrane. The phosphatidylinositol group is linked via the C-6 hydroxyl residue of inositol to a carbohydrate chain which is itself linked to the protein via an ethanolamine phosphate group, its amino group forming an amide linkage with the C-terminal carboxyl of the protein. Some GPI anchors have variants on this canonical linkage. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of Lj0g3v0264169.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0264169.1, powered by CORGI.
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