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Lj0g3v0265159.2

Overview

Field Value
Gene ID Lj0g3v0265159
Transcript ID Lj0g3v0265159.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 23 23
TMHMM 23 45 23
Phobius 24 45 22
Phobius 46 91 46
PANTHER 60 167 108 7.70E-42
PANTHER 60 167 108 7.70E-42
Phobius 92 108 17
Pfam 92 166 75 2.70E-06
Phobius 109 119 11
Phobius 120 138 19
Phobius 139 167 29

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Transmembrane transport The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other.

LORE1 insertions 2

Expression data

Expression pattern

Expression pattern of Lj0g3v0265159.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0265159.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.