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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0271789 |
| Transcript ID | Lj0g3v0271789.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | RecName: Full=Protein TIC 55, chloroplastic; AltName: Full=Rieske iron-sulfur protein TIC55; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 55; Short=PsTIC55; Flags: Precursorgi|2764524|emb|CAA04157.1| Rieske iron-sulfur protein Tic55 [Pisum sativum] gi|75219721|sp|O49931.1|TIC55_PEA |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 93 | 93 | 3.90E-136 | – | |
| PANTHER | 1 | 93 | 93 | 3.90E-136 | – | |
| Phobius | 1 | 149 | 149 | – | – | |
| Pfam | 2 | 49 | 48 | 4.90E-09 | ||
| SUPERFAMILY | 4 | 79 | 76 | 7.69E-05 | – | |
| PANTHER | 119 | 210 | 92 | 3.90E-136 | – | |
| PANTHER | 119 | 210 | 92 | 3.90E-136 | – | |
| TMHMM | 147 | 169 | 23 | – | – | |
| Phobius | 150 | 170 | 21 | – | – | |
| Phobius | 171 | 175 | 5 | – | – | |
| Phobius | 176 | 198 | 23 | – | – | |
| TMHMM | 176 | 198 | 23 | – | – | |
| Phobius | 199 | 210 | 12 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Chlorophyllide a oxygenase [overall] activity | Catalysis of the reactions: chlorophyllide a + O2 + NADPH + H+ = 7-hydroxychlorophyllide a + H2O + NADP+; and 7-hydroxychlorophyllide a + O2 + NADPH + H+ = chlorophyllide b + 2 H2O + NADP+. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0271789.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0271789.1, powered by CORGI.
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