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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0271849 |
| Transcript ID | Lj0g3v0271849.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic-like [Glycine max] gi|356544092|ref|XP_003540489.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 50 | 407 | 358 | 2.00E-249 | – | |
| PANTHER | 50 | 407 | 358 | 2.00E-249 | – | |
| Hamap | 51 | 390 | 340 | 40.39 | ||
| Gene3D | 52 | 389 | 338 | 5.60E-125 | – | |
| SUPERFAMILY | 53 | 390 | 338 | 9.68E-100 | – | |
| Pfam | 53 | 388 | 336 | 4.90E-110 | ||
| TIGRFAM | 54 | 387 | 334 | 7.50E-121 | ||
| CDD | 56 | 388 | 333 | 1.84E-163 | ||
| ProSitePatterns | 67 | 76 | 10 | – | ||
| ProSitePatterns | 186 | 202 | 17 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Uroporphyrinogen decarboxylase activity | Catalysis of the reaction: uroporphyrinogen-III = coproporphyrinogen + 4 CO2. | ||
| Biological process | Porphyrin-containing compound biosynthetic process | The chemical reactions and pathways resulting in the formation of any member of a large group of derivatives or analogs of porphyrin. Porphyrin consists of a ring of four pyrrole nuclei linked each to the next at their alpha positions through a methine group. |
Expression pattern of Lj0g3v0271849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0271849.1, powered by CORGI.
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