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Lj0g3v0276039.1

Overview

Field	Value
Gene ID	Lj0g3v0276039
Transcript ID	Lj0g3v0276039.1
Lotus japonicus genome version	MG20 v3.0
Description	PREDICTED: meiotic nuclear division protein 1 homolog [Glycine max] gi\|356498300\|ref\|XP_003517991.1\|
Working Lj name	n.a.

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Prediction algorithm	Identifier	Start	End	Length	E-value	InterPro ID
PANTHER	PTHR31398:SF0 View details on PTHR31398:SF0 Search for proteins/transripts with this domain View external data on PTHR31398:SF0	1	208	208	4.80E-85	–
PANTHER	PTHR31398 View details on PTHR31398 Search for proteins/transripts with this domain View external data on PTHR31398	1	208	208	4.80E-85	–
PIRSF	PIRSF026991 View details on PIRSF026991 Search for proteins/transripts with this domain View external data on PIRSF026991	1	210	210	2.40E-80	IPR005647 Show description in modal box View details on IPR005647 Search for proteins/transripts with this domain View on EBI InterPro Service
Pfam	PF03962 View details on PF03962 Search for proteins/transripts with this domain View external data on PF03962	16	204	189	1.70E-57	IPR005647 Show description in modal box View details on IPR005647 Search for proteins/transripts with this domain View on EBI InterPro Service
Coils	Coil View details on Coil Search for proteins/transripts with this domain	119	146	28	–	–

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003690 View details of GO:0003690 AmiGO InterPro QuickGO	Molecular function	Double-stranded DNA binding	Interacting selectively and non-covalently with double-stranded DNA.	Subterm of View details of GO:0003677
GO:0007131 View details of GO:0007131 AmiGO InterPro QuickGO	Biological process	Reciprocal meiotic recombination	The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.	Subterm of View details of GO:0035825 View details of GO:1903046 Part of View details of GO:0007127

Genome browser

LORE1 insertions 3

Expression data

Expression pattern

Expression pattern of Lj0g3v0276039.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0276039.1, powered by CORGI.

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