Domain Predictions — View

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PF03962

Source: Pfam

Description

Mnd1 family

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on April 27, 2020, while the GO metadata was last updated on April 27, 2020.

GO term	Namespace	Name	Definition	Relationships
GO:0003690 View details of GO:0003690 AmiGO InterPro QuickGO	Molecular function	Double-stranded DNA binding	Interacting selectively and non-covalently with double-stranded DNA.	Subterm of GO:0003677
GO:0007131 View details of GO:0007131 AmiGO InterPro QuickGO	Biological process	Reciprocal meiotic recombination	The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate. This results in the equal exchange of genetic material between non-sister chromatids in a pair of homologous chromosomes. These reciprocal recombinant products ensure the proper segregation of homologous chromosomes during meiosis I and create genetic diversity.	Subterm of GO:0035825 GO:1903046 Part of GO:0007127

Associated Lotus transcripts 2

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0276039.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: meiotic nuclear division protein 1 homolog [Glycine max] gi\|356498300\|ref\|XP_003517991.1\|	Domains Coil IPR005647 PF03962 PIRSF026991 PTHR31398 PTHR31398:SF0	6
LotjaGi2g1v0228800.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Meiotic nuclear division protein 1 homolog; TAIR: AT4G29170.1 Mnd1 family protein; Swiss-Prot: sp\|Q8GYD2\|MND1_ARATH Meiotic nuclear division protein 1 homolog; TrEMBL-Plants: tr\|I1J4E4\|I1J4E4_SOYBN Meiotic nuclear division protein 1 homolog; Found in the gene: LotjaGi2g1v0228800	Domains Coil IPR005647 IPR040453 IPR040661 PF03962 PF18517 PIRSF026991 PTHR31398	8

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
PTHR31398	PANTHER	1	50.00