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Lj0g3v0280879.1

Overview

Field Value
Gene ID Lj0g3v0280879
Transcript ID Lj0g3v0280879.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase-like [Glycine max] gi|356528218|ref|XP_003532702.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 20 20
PANTHER 4 281 278 3.80E-157
PANTHER 4 281 278 3.80E-157
TMHMM 21 39 19
Phobius 21 39 19
Pfam 28 280 253 4.00E-104
Phobius 40 111 72
TMHMM 111 130 20
Phobius 112 130 19
Phobius 131 141 11
Phobius 142 157 16
TMHMM 143 157 15
Phobius 158 162 5
TMHMM 162 179 18
Phobius 163 179 17
Phobius 180 185 6
TMHMM 186 208 23
Phobius 186 209 24
Phobius 210 228 19
TMHMM 228 250 23
Phobius 229 249 21
Phobius 250 281 32

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Endoplasmic reticulum membrane The lipid bilayer surrounding the endoplasmic reticulum.
Molecular function Transferase activity, transferring hexosyl groups Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor).

LORE1 insertions 10

Expression data

Expression pattern

Expression pattern of Lj0g3v0280879.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0280879.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.