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Lj0g3v0282629.1

Overview

Field Value
Gene ID Lj0g3v0282629
Transcript ID Lj0g3v0282629.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Glycine max] gi|356567000|ref|XP_003551712.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 364 364 7.30E-218
PANTHER 1 364 364 7.30E-218
Gene3D 9 61 53 5.70E-50
SUPERFAMILY 22 36 15 6.99E-32
SUPERFAMILY 65 282 218 6.99E-32
CDD 67 285 219 5.52E-40
Gene3D 94 331 238 5.70E-50
Pfam 123 281 159 2.90E-36
SUPERFAMILY 311 327 17 6.99E-32

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0282629.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0282629.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.