Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

Lj0g3v0282629.1

Overview

Field Value
Gene ID Lj0g3v0282629
Transcript ID Lj0g3v0282629.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: phospholipase A(1) DAD1, chloroplastic-like [Glycine max] gi|356567000|ref|XP_003551712.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31403:SF12
1 364 364 7.30E-218 –
PANTHER
PTHR31403
1 364 364 7.30E-218 –
Gene3D
G3DSA:3.40.50.1820
9 61 53 5.70E-50
IPR029058
SUPERFAMILY
SSF53474
22 36 15 6.99E-32
IPR029058
SUPERFAMILY
SSF53474
65 282 218 6.99E-32
IPR029058
CDD
cd00519
67 285 219 5.52E-40 –
Gene3D
G3DSA:3.40.50.1820
94 331 238 5.70E-50
IPR029058
Pfam
PF01764
123 281 159 2.90E-36
IPR002921
SUPERFAMILY
SSF53474
311 327 17 6.99E-32
IPR029058

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006629
Biological process Lipid metabolic process The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj0g3v0282629.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0282629.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.