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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0292309 |
| Transcript ID | Lj0g3v0292309.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: nucleobase-ascorbate transporter 12-like [Glycine max] gi|356565691|ref|XP_003551071.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 265 | 265 | 0 | ||
| PANTHER | 1 | 265 | 265 | 0 | ||
| Phobius | 1 | 50 | 50 | – | – | |
| Phobius | 51 | 74 | 24 | – | – | |
| Pfam | 53 | 470 | 418 | 1.90E-70 | ||
| TMHMM | 55 | 77 | 23 | – | – | |
| Phobius | 75 | 85 | 11 | – | – | |
| TMHMM | 84 | 106 | 23 | – | – | |
| Phobius | 86 | 105 | 20 | – | – | |
| Phobius | 106 | 110 | 5 | – | – | |
| TMHMM | 111 | 128 | 18 | – | – | |
| Phobius | 111 | 129 | 19 | – | – | |
| Phobius | 130 | 149 | 20 | – | – | |
| TMHMM | 149 | 171 | 23 | – | – | |
| Phobius | 150 | 174 | 25 | – | – | |
| Phobius | 175 | 193 | 19 | – | – | |
| Phobius | 194 | 218 | 25 | – | – | |
| TMHMM | 195 | 217 | 23 | – | – | |
| Phobius | 219 | 229 | 11 | – | – | |
| TMHMM | 224 | 246 | 23 | – | – | |
| Phobius | 230 | 249 | 20 | – | – | |
| Phobius | 250 | 309 | 60 | – | – | |
| PANTHER | 284 | 473 | 190 | 0 | ||
| PANTHER | 284 | 473 | 190 | 0 | ||
| TMHMM | 306 | 328 | 23 | – | – | |
| Phobius | 310 | 328 | 19 | – | – | |
| Phobius | 329 | 393 | 65 | – | – | |
| TMHMM | 394 | 416 | 23 | – | – | |
| Phobius | 394 | 415 | 22 | – | – | |
| Phobius | 416 | 420 | 5 | – | – | |
| TMHMM | 421 | 440 | 20 | – | – | |
| Phobius | 421 | 440 | 20 | – | – | |
| Phobius | 441 | 451 | 11 | – | – | |
| Phobius | 452 | 470 | 19 | – | – | |
| TMHMM | 453 | 475 | 23 | – | – | |
| Phobius | 471 | 506 | 36 | – | – | |
| PANTHER | 495 | 577 | 83 | 0 | ||
| PANTHER | 495 | 577 | 83 | 0 | ||
| TMHMM | 505 | 527 | 23 | – | – | |
| Phobius | 507 | 527 | 21 | – | – | |
| Phobius | 528 | 577 | 50 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj0g3v0292309.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0292309.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.