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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0292789 |
| Transcript ID | Lj0g3v0292789.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Phox-associated domain,Phox-like,Sorting nexin isoform 3 [Theobroma cacao] gi|508779534|gb|EOY26790.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | – | – | |
| PANTHER | 7 | 351 | 345 | 0 | – | |
| PANTHER | 7 | 351 | 345 | 0 | – | |
| Phobius | 21 | 37 | 17 | – | – | |
| TMHMM | 22 | 44 | 23 | – | – | |
| Phobius | 38 | 42 | 5 | – | – | |
| Phobius | 43 | 60 | 18 | – | – | |
| Phobius | 61 | 696 | 636 | – | – | |
| ProSiteProfiles | 106 | 285 | 180 | 44.446 | ||
| Pfam | 106 | 283 | 178 | 7.40E-35 | ||
| SMART | 110 | 289 | 180 | 1.10E-04 | ||
| MobiDBLite | 335 | 387 | 53 | – | – | |
| PANTHER | 373 | 466 | 94 | 0 | – | |
| PANTHER | 373 | 466 | 94 | 0 | – | |
| MobiDBLite | 421 | 500 | 80 | – | – | |
| MobiDBLite | 512 | 597 | 86 | – | – | |
| PANTHER | 590 | 685 | 96 | 0 | – | |
| PANTHER | 590 | 685 | 96 | 0 | – | |
| MobiDBLite | 612 | 636 | 25 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of Lj0g3v0292789.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0292789.1, powered by CORGI.
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