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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0301069 |
| Transcript ID | Lj0g3v0301069.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: MLO-like protein 6-like [Glycine max] gi|356544617|ref|XP_003540745.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 16 | 16 | – | – | |
| PANTHER | 2 | 545 | 544 | 0 | – | |
| PANTHER | 2 | 545 | 544 | 0 | – | |
| Pfam | 9 | 497 | 489 | 7.60E-236 | ||
| TMHMM | 15 | 37 | 23 | – | – | |
| Phobius | 17 | 40 | 24 | – | – | |
| Phobius | 41 | 60 | 20 | – | – | |
| Phobius | 61 | 80 | 20 | – | – | |
| TMHMM | 63 | 85 | 23 | – | – | |
| Phobius | 81 | 162 | 82 | – | – | |
| MobiDBLite | 96 | 119 | 24 | – | – | |
| Phobius | 163 | 184 | 22 | – | – | |
| TMHMM | 163 | 185 | 23 | – | – | |
| Phobius | 185 | 289 | 105 | – | – | |
| Phobius | 290 | 310 | 21 | – | – | |
| TMHMM | 290 | 312 | 23 | – | – | |
| Phobius | 311 | 315 | 5 | – | – | |
| TMHMM | 316 | 338 | 23 | – | – | |
| Phobius | 316 | 338 | 23 | – | – | |
| Phobius | 339 | 371 | 33 | – | – | |
| Phobius | 372 | 391 | 20 | – | – | |
| TMHMM | 374 | 396 | 23 | – | – | |
| Phobius | 392 | 410 | 19 | – | – | |
| TMHMM | 411 | 433 | 23 | – | – | |
| Phobius | 411 | 436 | 26 | – | – | |
| Phobius | 437 | 564 | 128 | – | – | |
| MobiDBLite | 508 | 529 | 22 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Defense response | Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0301069.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0301069.1, powered by CORGI.
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