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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0305209 |
| Transcript ID | Lj0g3v0305209.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Peroxidase [Medicago truncatula] gi|357491405|ref|XP_003615990.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 22 | 22 | – | – | |
| PANTHER | 1 | 320 | 320 | 1.40E-212 | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| SignalP | 1 | 22 | 22 | – | – | |
| Phobius | 1 | 3 | 3 | – | – | |
| PANTHER | 1 | 320 | 320 | 1.40E-212 | – | |
| Phobius | 4 | 17 | 14 | – | – | |
| Phobius | 18 | 22 | 5 | – | – | |
| ProSiteProfiles | 23 | 320 | 298 | 70.299 | ||
| Phobius | 23 | 320 | 298 | – | – | |
| SUPERFAMILY | 24 | 320 | 297 | 3.09E-103 | ||
| CDD | 24 | 319 | 296 | 1.04E-160 | ||
| Gene3D | 30 | 178 | 149 | 5.60E-32 | – | |
| PRINTS | 33 | 52 | 20 | 2.00E-49 | ||
| Pfam | 43 | 283 | 241 | 5.70E-73 | ||
| ProSitePatterns | 55 | 66 | 12 | – | ||
| PRINTS | 55 | 69 | 15 | 1.50E-25 | ||
| PRINTS | 57 | 77 | 21 | 2.00E-49 | ||
| PRINTS | 97 | 110 | 14 | 2.00E-49 | ||
| PRINTS | 117 | 127 | 11 | 2.00E-49 | ||
| PRINTS | 118 | 135 | 18 | 1.50E-25 | ||
| PRINTS | 138 | 150 | 13 | 1.50E-25 | ||
| Gene3D | 179 | 299 | 121 | 2.50E-44 | – | |
| PRINTS | 185 | 197 | 13 | 2.00E-49 | ||
| PRINTS | 186 | 201 | 16 | 1.50E-25 | ||
| ProSitePatterns | 186 | 196 | 11 | – | ||
| PRINTS | 236 | 251 | 16 | 2.00E-49 | ||
| PRINTS | 238 | 253 | 16 | 1.50E-25 | ||
| PRINTS | 252 | 269 | 18 | 2.00E-49 | ||
| PRINTS | 294 | 307 | 14 | 2.00E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of Lj0g3v0305209.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0305209.1, powered by CORGI.
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