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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0310849 |
| Transcript ID | Lj0g3v0310849.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max] gi|356576454|ref|XP_003556346.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 88 | 87 | 8.90E-125 | – | |
| PANTHER | 2 | 88 | 87 | 8.90E-125 | – | |
| SUPERFAMILY | 3 | 109 | 107 | 2.55E-26 | ||
| Gene3D | 4 | 87 | 84 | 4.00E-23 | ||
| ProSiteProfiles | 6 | 82 | 77 | 16.62 | ||
| SMART | 7 | 78 | 72 | 5.10E-22 | ||
| Pfam | 8 | 75 | 68 | 8.80E-16 | ||
| CDD | 8 | 78 | 71 | 6.96E-35 | – | |
| MobiDBLite | 84 | 109 | 26 | – | – | |
| Gene3D | 91 | 205 | 115 | 4.80E-29 | ||
| PANTHER | 109 | 194 | 86 | 8.90E-125 | – | |
| PANTHER | 109 | 194 | 86 | 8.90E-125 | – | |
| SUPERFAMILY | 110 | 218 | 109 | 1.75E-28 | ||
| CDD | 110 | 189 | 80 | 1.84E-44 | – | |
| ProSiteProfiles | 112 | 189 | 78 | 19.212 | ||
| SMART | 113 | 185 | 73 | 1.90E-26 | ||
| Pfam | 114 | 180 | 67 | 2.50E-17 | ||
| PANTHER | 257 | 295 | 39 | 8.90E-125 | – | |
| PANTHER | 257 | 295 | 39 | 8.90E-125 | – | |
| MobiDBLite | 337 | 356 | 20 | – | – | |
| PANTHER | 368 | 434 | 67 | 8.90E-125 | – | |
| PANTHER | 368 | 434 | 67 | 8.90E-125 | – | |
| MobiDBLite | 392 | 479 | 88 | – | – | |
| PANTHER | 454 | 479 | 26 | 8.90E-125 | – | |
| PANTHER | 454 | 479 | 26 | 8.90E-125 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj0g3v0310849.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0310849.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.