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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0326259 |
| Transcript ID | Lj0g3v0326259.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: transcription factor IIIA-like [Cicer arietinum] gi|502123985|ref|XP_004498336.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 330 | 328 | 5.30E-91 | – | |
| PANTHER | 3 | 330 | 328 | 5.30E-91 | – | |
| SMART | 19 | 41 | 23 | 25 | ||
| MobiDBLite | 39 | 61 | 23 | – | – | |
| Gene3D | 60 | 85 | 26 | 1.50E-10 | ||
| SUPERFAMILY | 60 | 114 | 55 | 7.56E-12 | – | |
| ProSiteProfiles | 62 | 89 | 28 | 14.274 | ||
| SMART | 62 | 84 | 23 | 0.021 | ||
| ProSitePatterns | 64 | 84 | 21 | – | ||
| Gene3D | 86 | 117 | 32 | 3.70E-13 | ||
| SMART | 90 | 114 | 25 | 0.0029 | ||
| ProSiteProfiles | 90 | 119 | 30 | 10.076 | ||
| ProSitePatterns | 92 | 114 | 23 | – | ||
| SUPERFAMILY | 100 | 157 | 58 | 4.46E-08 | – | |
| Gene3D | 118 | 140 | 23 | 9.90E-07 | ||
| SMART | 119 | 144 | 26 | 0.013 | ||
| ProSiteProfiles | 119 | 149 | 31 | 11.552 | ||
| ProSitePatterns | 121 | 144 | 24 | – | ||
| Gene3D | 155 | 183 | 29 | 1.50E-08 | ||
| SUPERFAMILY | 156 | 183 | 28 | 1.86E-05 | – | |
| ProSiteProfiles | 159 | 188 | 30 | 11.198 | ||
| SMART | 159 | 183 | 25 | 6.00E-04 | ||
| ProSitePatterns | 161 | 183 | 23 | – | ||
| SMART | 191 | 216 | 26 | 1.3 | ||
| Gene3D | 192 | 216 | 25 | 8.10E-04 | ||
| ProSitePatterns | 193 | 216 | 24 | – | ||
| SMART | 219 | 240 | 22 | 11 | ||
| Gene3D | 230 | 271 | 42 | 4.60E-06 | ||
| SUPERFAMILY | 230 | 288 | 59 | 1.55E-09 | – | |
| ProSiteProfiles | 249 | 279 | 31 | 12.715 | ||
| SMART | 249 | 274 | 26 | 0.0031 | ||
| ProSitePatterns | 251 | 274 | 24 | – | ||
| Gene3D | 273 | 303 | 31 | 4.20E-06 | ||
| SMART | 280 | 306 | 27 | 5.7 | ||
| ProSitePatterns | 282 | 306 | 25 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Nucleic acid binding | Interacting selectively and non-covalently with any nucleic acid. |
Expression pattern of Lj0g3v0326259.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0326259.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.