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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0344389 |
| Transcript ID | Lj0g3v0344389.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: ATP-dependent DNA helicase pcrA-like [Glycine max] gi|356574720|ref|XP_003555493.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 130 | 764 | 635 | 0 | – | |
| PANTHER | 130 | 764 | 635 | 0 | ||
| MobiDBLite | 194 | 214 | 21 | – | – | |
| SUPERFAMILY | 222 | 665 | 444 | 2.00E-116 | ||
| Gene3D | 225 | 367 | 143 | 1.10E-67 | ||
| ProSiteProfiles | 226 | 522 | 297 | 41.691 | ||
| Pfam | 227 | 507 | 281 | 2.10E-62 | ||
| Gene3D | 410 | 509 | 100 | 1.10E-67 | ||
| Pfam | 513 | 891 | 379 | 6.50E-43 | ||
| Gene3D | 517 | 632 | 116 | 4.30E-49 | ||
| ProSiteProfiles | 523 | 835 | 313 | 12.495 | ||
| SUPERFAMILY | 778 | 915 | 138 | 2.00E-116 | ||
| PANTHER | 797 | 1103 | 307 | 0 | – | |
| PANTHER | 797 | 1103 | 307 | 0 | ||
| Gene3D | 823 | 916 | 94 | 4.30E-49 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA helicase activity | Catalysis of the reaction: NTP + H2O = NDP + phosphate, to drive the unwinding of a DNA helix. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of Lj0g3v0344389.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0344389.1, powered by CORGI.
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