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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0346729 |
| Transcript ID | Lj0g3v0346729.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: tetraspanin-20-like [Cicer arietinum] gi|502114718|ref|XP_004495030.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 11 | 11 | – | – | |
| PANTHER | 6 | 211 | 206 | 6.20E-110 | – | |
| PANTHER | 6 | 211 | 206 | 6.20E-110 | – | |
| Pfam | 12 | 126 | 115 | 1.30E-09 | ||
| TMHMM | 12 | 34 | 23 | – | – | |
| Phobius | 12 | 34 | 23 | – | – | |
| Phobius | 35 | 70 | 36 | – | – | |
| Phobius | 71 | 93 | 23 | – | – | |
| TMHMM | 71 | 93 | 23 | – | – | |
| Phobius | 94 | 99 | 6 | – | – | |
| TMHMM | 100 | 122 | 23 | – | – | |
| Phobius | 100 | 125 | 26 | – | – | |
| Phobius | 126 | 156 | 31 | – | – | |
| TMHMM | 154 | 176 | 23 | – | – | |
| Phobius | 157 | 176 | 20 | – | – | |
| Phobius | 177 | 247 | 71 | – | – | |
| MobiDBLite | 200 | 247 | 48 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of Lj0g3v0346729.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0346729.1, powered by CORGI.
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