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Lj0g3v0348239.1

Overview

Field Value
Gene ID Lj0g3v0348239
Transcript ID Lj0g3v0348239.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: chalcone synthase-like [Glycine max] gi|356495881|ref|XP_003516799.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 21 21 – –
PANTHER
PTHR11877:SF25
13 186 174 6.40E-123 –
PANTHER
PTHR11877
13 186 174 6.40E-123 –
Gene3D
G3DSA:3.40.47.10
18 186 169 4.90E-52
IPR016039
SUPERFAMILY
SSF53901
19 185 167 3.66E-35
IPR016039
Pfam
PF00195
20 186 167 1.70E-72
IPR001099

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of

Genome browser

LORE1 insertions 1

Expression data

Expression pattern

Expression pattern of Lj0g3v0348239.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0348239.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.