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Field | Value |
---|---|
Gene ID | Lj0g3v0359339 |
Transcript ID | Lj0g3v0359339.1 |
Lotus japonicus genome version | MG20 v3.0 |
Description | PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase-like [Glycine max] gi|356531218|ref|XP_003534175.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 20 | 20 | – | – | |
PANTHER | 3 | 179 | 177 | 5.20E-93 | ||
PANTHER | 3 | 179 | 177 | 5.20E-93 | – | |
Pfam | 10 | 167 | 158 | 2.80E-52 | ||
ProSiteProfiles | 16 | 158 | 143 | 15.088 | ||
TMHMM | 20 | 42 | 23 | – | – | |
Phobius | 21 | 40 | 20 | – | – | |
Phobius | 41 | 78 | 38 | – | – | |
TMHMM | 74 | 96 | 23 | – | – | |
Phobius | 79 | 97 | 19 | – | – | |
Phobius | 98 | 103 | 6 | – | – | |
TMHMM | 103 | 125 | 23 | – | – | |
Phobius | 104 | 127 | 24 | – | – | |
Phobius | 128 | 138 | 11 | – | – | |
Phobius | 139 | 162 | 24 | – | – | |
TMHMM | 140 | 162 | 23 | – | – | |
Phobius | 163 | 181 | 19 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
Biological process | Sterol metabolic process | The chemical reactions and pathways involving sterols, steroids with one or more hydroxyl groups and a hydrocarbon side-chain in the molecule. | ||
Molecular function | Cholestenol delta-isomerase activity | Catalysis of the reaction: 5-alpha-cholest-7-en-3-beta-ol = 5-alpha-cholest-8-en-3-beta-ol. |
Expression pattern of Lj0g3v0359339.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0359339.1, powered by CORGI.
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