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Lj0g3v0359549.2

Overview

Field Value
Gene ID Lj0g3v0359549
Transcript ID Lj0g3v0359549.2
Related isoforms 2
Lotus japonicus genome version MG20 v3.0
Description DREB [Glycine max] gi|32480821|gb|AAP83131.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR31241:SF2
10 177 168 2.10E-85 –
PANTHER
PTHR31241
10 177 168 2.10E-85 –
MobiDBLite
mobidb-lite
31 61 31 – –
Pfam
PF00847
65 115 51 3.40E-13
IPR001471
CDD
cd00018
65 125 61 5.14E-33
IPR001471
SMART
SM00380
66 129 64 2.50E-37
IPR001471
ProSiteProfiles
PS51032
66 123 58 21.799
IPR001471
Gene3D
G3DSA:3.30.730.10
66 124 59 8.30E-32
IPR001471
SUPERFAMILY
SSF54171
66 123 58 5.62E-21
IPR016177
PRINTS
PR00367
67 78 12 1.10E-11
IPR001471
PRINTS
PR00367
105 125 21 1.10E-11
IPR001471

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003677
Molecular function DNA binding Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
Subterm of
GO:0003700
Molecular function DNA-binding transcription factor activity A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons.
Subterm of
GO:0006355
Biological process Regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
Subterm of
Regulates

Genome browser

LORE1 insertions 6

Expression data

Expression pattern

Expression pattern of Lj0g3v0359549.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj0g3v0359549.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.