Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001471
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 317 results. Now displaying 1 of 7 with 50 rows per page. This search has taken 6.023s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0031929.1
n.a. PREDICTED: ethylene-responsive transcription factor 5-like [Cicer arietinum] gi|502152486|ref|XP_004508947.1| chr0 10036939 10038185 +
7 domain predictions
2 GO terms
Lj0g3v0034709.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF014-like [Cicer arietinum] gi|502130202|ref|XP_004500566.1| chr0 11047669 11048543 +
7 domain predictions
2 GO terms
Lj0g3v0037529.1
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr0 12055031 12059052 +
6 domain predictions
2 GO terms
Lj0g3v0037529.2
n.a. PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Glycine max] gi|356547208|ref|XP_003542008.1| chr0 12055031 12059052 +
7 domain predictions
2 GO terms
Lj0g3v0046879.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF061-like [Glycine max] gi|356495715|ref|XP_003516719.1| chr0 15632887 15634364 -
7 domain predictions
2 GO terms
Lj0g3v0070699.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356566177|ref|XP_003551311.1| chr0 25820956 25823853 +
7 domain predictions
2 GO terms
Lj0g3v0075069.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF098-like [Cicer arietinum] gi|502115014|ref|XP_004495105.1| chr0 28431701 28432588 +
7 domain predictions
2 GO terms
Lj0g3v0089119.1
n.a. mutant AP2/ERF transcription factor [synthetic construct] gi|294991783|gb|ADF57183.1| chr0 36519654 36520207 -
5 domain predictions
2 GO terms
Lj0g3v0092269.1
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38363533 38368563 +
7 domain predictions
2 GO terms
Lj0g3v0092269.2
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38363533 38367394 +
7 domain predictions
2 GO terms
Lj0g3v0092269.3
n.a. PREDICTED: floral homeotic protein APETALA 2-like [Glycine max] gi|356563604|ref|XP_003550051.1| chr0 38365404 38367394 +
7 domain predictions
2 GO terms
Lj0g3v0094869.1
n.a. PREDICTED: dehydration-responsive element-binding protein 3-like [Cicer arietinum] gi|502131936|ref|XP_004501158.1| chr0 39898612 39900710 +
7 domain predictions
2 GO terms
Lj0g3v0096239.1
n.a. ethylene-responsive factor 2 [Halimodendron halodendron] gi|223038250|gb|ACM79120.1| chr0 40576185 40578326 +
7 domain predictions
2 GO terms
Lj0g3v0101719.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF054-like [Glycine max] gi|356547020|ref|XP_003541916.1| chr0 43178350 43180754 -
7 domain predictions
2 GO terms
Lj0g3v0114779.1
n.a. CM0545.620.nc [Lotus japonicus] gi|164564747|dbj|BAF98227.1| chr0 50336772 50337256 +
7 domain predictions
2 GO terms
Lj0g3v0119889.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor AIL5-like [Brachypodium distachyon] gi|357119933|ref|XP_003561687.1| chr0 53187762 53190380 +
6 domain predictions
2 GO terms
Lj0g3v0127459.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF106-like [Cicer arietinum] gi|502118070|ref|XP_004496086.1| chr0 57446519 57447514 -
7 domain predictions
2 GO terms
Lj0g3v0128379.1
n.a. n.a. chr0 57983785 57986172 -
7 domain predictions
2 GO terms
Lj0g3v0150929.1
n.a. PREDICTED: ethylene-responsive transcription factor CRF4-like [Glycine max] gi|356560648|ref|XP_003548602.1| chr0 70308892 70310663 -
7 domain predictions
2 GO terms
Lj0g3v0203079.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF008-like [Glycine max] gi|356565549|ref|XP_003551002.1| chr0 100611414 100612348 -
7 domain predictions
2 GO terms
Lj0g3v0209889.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF024-like [Glycine max] gi|356570831|ref|XP_003553587.1| chr0 105386262 105387824 +
7 domain predictions
2 GO terms
Lj0g3v0223059.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237569|dbj|BAG50061.1| chr0 114846138 114846936 -
7 domain predictions
2 GO terms
Lj0g3v0243159.1
n.a. PREDICTED: ethylene-responsive transcription factor WIN1-like [Glycine max] gi|356519349|ref|XP_003528335.1| chr0 126098851 126100401 +
7 domain predictions
2 GO terms
Lj0g3v0250529.1
n.a. n.a. chr0 129875517 129877507 -
7 domain predictions
2 GO terms
Lj0g3v0250539.1
n.a. PREDICTED: ethylene-responsive transcription factor 2-like [Glycine max] gi|356520778|ref|XP_003529037.1| chr0 129875517 129876467 +
7 domain predictions
2 GO terms
Lj0g3v0253889.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF003-like [Cicer arietinum] gi|502174548|ref|XP_004515544.1| chr0 131738530 131739597 -
7 domain predictions
2 GO terms
Lj0g3v0254389.1
n.a. PREDICTED: AP2-like ethylene-responsive transcription factor PLT2-like [Glycine max] gi|356541922|ref|XP_003539421.1| chr0 132080493 132083316 +
7 domain predictions
2 GO terms
Lj0g3v0254749.1
n.a. n.a. chr0 132281179 132287068 +
6 domain predictions
2 GO terms
Lj0g3v0254749.2
n.a. n.a. chr0 132281179 132287068 +
6 domain predictions
2 GO terms
Lj0g3v0273719.1
n.a. PREDICTED: ethylene-responsive transcription factor 5-like [Glycine max] gi|356541103|ref|XP_003539022.1| chr0 141882229 141884018 +
7 domain predictions
2 GO terms
Lj0g3v0284449.1
n.a. Ethylene responsive transcription factor 1a [Medicago truncatula] gi|357463809|ref|XP_003602186.1| chr0 147575660 147577647 -
7 domain predictions
2 GO terms
Lj0g3v0293529.1
n.a. PREDICTED: ethylene-responsive transcription factor 4-like [Glycine max] gi|356522656|ref|XP_003529962.1| chr0 152354291 152356893 +
7 domain predictions
2 GO terms
Lj0g3v0306799.1
n.a. Ethylene-responsive transcription factor [Medicago truncatula] gi|358349432|ref|XP_003638741.1| chr0 160123145 160124239 -
7 domain predictions
2 GO terms
Lj0g3v0311029.1
n.a. dehydration responsive element binding protein [Glycine max] gi|351724471|ref|NP_001235779.1| chr0 162426894 162428287 +
7 domain predictions
2 GO terms
Lj0g3v0317699.1
n.a. ethylene response factor 11 [Medicago sativa] gi|353078622|gb|AEQ64867.1| chr0 165993283 165994761 -
7 domain predictions
2 GO terms
Lj0g3v0332559.1
n.a. PREDICTED: ethylene-responsive transcription factor 1B-like [Glycine max] gi|356536967|ref|XP_003537003.1| chr0 174033925 174035421 +
7 domain predictions
2 GO terms
Lj0g3v0338549.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF098-like [Glycine max] gi|356574758|ref|XP_003555512.1| chr0 177237785 177238493 +
7 domain predictions
2 GO terms
Lj0g3v0344459.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF054-like [Glycine max] gi|356515194|ref|XP_003526286.1| chr0 180743044 180744333 -
7 domain predictions
2 GO terms
Lj0g3v0357169.1
n.a. PREDICTED: dehydration-responsive element-binding protein 1F-like isoform 1 [Glycine max] gi|356497210|ref|XP_003517455.1| chr0 188070637 188072397 -
7 domain predictions
2 GO terms
Lj0g3v0359549.1
n.a. DREB [Glycine max] gi|32480821|gb|AAP83131.1| chr0 189279967 189282040 -
7 domain predictions
2 GO terms
Lj0g3v0359549.2
n.a. DREB [Glycine max] gi|32480821|gb|AAP83131.1| chr0 189280489 189282040 -
7 domain predictions
2 GO terms
Lj0g3v0360709.1
n.a. transcription factor AP2-EREBP [Lotus japonicus] gi|193237561|dbj|BAG50057.1| chr0 189972761 189975726 +
7 domain predictions
2 GO terms
Lj1g3v0318230.1
n.a. TINY [Glycine max] gi|351723937|ref|NP_001237808.1| chr1 3699485 3700091 -
6 domain predictions
2 GO terms
Lj1g3v1222700.1
n.a. Ethylene-responsive transcription factor ERF110 [Medicago truncatula] gi|357464465|ref|XP_003602514.1| chr1 15055348 15057344 -
7 domain predictions
2 GO terms
Lj1g3v1676620.1
n.a. dehydration responsive element binding protein [Halimodendron halodendron] gi|215401554|gb|ACJ66376.1| chr1 19957760 19958782 -
7 domain predictions
2 GO terms
Lj1g3v1798550.1
n.a. Ethylene-responsive transcription factor RAP2-9 [Medicago truncatula] gi|357465925|ref|XP_003603247.1| chr1 21631969 21632712 -
7 domain predictions
2 GO terms
Lj1g3v1841220.1
n.a. PREDICTED: protein PPLZ02-like [Glycine max] gi|356507410|ref|XP_003522460.1| chr1 22375949 22377386 -
7 domain predictions
2 GO terms
Lj1g3v1911720.1
n.a. PREDICTED: ethylene-responsive transcription factor SHINE 3-like [Glycine max] gi|356515442|ref|XP_003526409.1| chr1 22677192 22678898 +
7 domain predictions
2 GO terms
Lj1g3v2114700.1
n.a. PREDICTED: ethylene-responsive transcription factor ERF026-like [Cicer arietinum] gi|502119418|ref|XP_004496613.1| chr1 25360897 25362306 -
2 domain predictions
2 GO terms
Lj1g3v2139690.1
n.a. PREDICTED: dehydration-responsive element-binding protein 2D-like [Glycine max] gi|356509658|ref|XP_003523563.1| chr1 25699750 25700881 +
7 domain predictions
2 GO terms