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| Field | Value |
|---|---|
| Gene ID | Lj0g3v0359979 |
| Transcript ID | Lj0g3v0359979.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Surfeit locus protein [Medicago truncatula] gi|357499121|ref|XP_003619849.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 65 | 65 | – | – | |
| SignalP | 1 | 42 | 42 | – | – | |
| PANTHER | 22 | 197 | 176 | 4.70E-103 | – | |
| PANTHER | 22 | 197 | 176 | 4.70E-103 | – | |
| ProSiteProfiles | 62 | 340 | 279 | 37.353 | ||
| Phobius | 66 | 84 | 19 | – | – | |
| Pfam | 70 | 326 | 257 | 3.00E-40 | ||
| CDD | 75 | 331 | 257 | 3.68E-46 | ||
| Phobius | 85 | 314 | 230 | – | – | |
| PANTHER | 232 | 343 | 112 | 4.70E-103 | – | |
| PANTHER | 232 | 343 | 112 | 4.70E-103 | – | |
| TMHMM | 314 | 333 | 20 | – | – | |
| Phobius | 315 | 333 | 19 | – | – | |
| Phobius | 334 | 343 | 10 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj0g3v0359979.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj0g3v0359979.1, powered by CORGI.
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