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Lj1g3v0183020.1

Overview

Field Value
Gene ID Lj1g3v0183020
Transcript ID Lj1g3v0183020.1
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: transcription factor AIG1-like [Glycine max] gi|356498844|ref|XP_003518258.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
24 61 38 – –
PANTHER
PTHR12565
33 101 69 2.60E-28 –
PANTHER
PTHR12565:SF120
33 101 69 2.60E-28 –
SUPERFAMILY
SSF47459
38 100 63 2.75E-14
IPR011598
CDD
cd00083
44 98 55 2.59E-06 –
ProSiteProfiles
PS50888
46 95 50 15.885
IPR011598
Pfam
PF00010
48 95 48 1.20E-12
IPR011598
Gene3D
G3DSA:4.10.280.10
49 99 51 5.30E-14
IPR011598
SMART
SM00353
52 101 50 8.10E-13
IPR011598
Coils
Coil
85 101 17 – –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046983
Molecular function Protein dimerization activity The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits.
Subterm of

Genome browser

LORE1 insertions

No LORE1 insertions have been found in the genomic region that overlaps with this gene.

Expression data

Expression pattern

Expression pattern of Lj1g3v0183020.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0183020.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.