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Field | Value |
---|---|
Gene ID | Lj1g3v0183130 |
Transcript ID | Lj1g3v0183130.1 |
Related isoforms 1 | |
Lotus japonicus genome version | MG20 v3.0 |
Description | Carbonic anhydrase [Medicago truncatula] gi|357489979|ref|XP_003615277.1| |
Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 36 | 149 | 114 | 2.40E-50 | – | |
PANTHER | 36 | 149 | 114 | 2.40E-50 | ||
SUPERFAMILY | 86 | 149 | 64 | 1.20E-17 | ||
Gene3D | 86 | 149 | 64 | 4.20E-17 | ||
Pfam | 124 | 149 | 26 | 4.70E-05 | ||
ProSitePatterns | 128 | 135 | 8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Carbonate dehydratase activity | Catalysis of the reaction: H2CO3 = CO2 + H2O. | ||
Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. | ||
Biological process | Carbon utilization | A series of processes that forms an integrated mechanism by which a cell or an organism detects the depletion of primary carbon sources and then activates genes to scavenge the last traces of the primary carbon source and to transport and metabolize alternative carbon sources such as carbon dioxide or carbonic acid. The utilization process begins when the cell or organism detects carbon levels, includes the activation of genes whose products detect, transport or metabolize carbon-containing substances, and ends when carbon is incorporated into the cell or organism's metabolism. |
Expression pattern of Lj1g3v0183130.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0183130.1, powered by CORGI.
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