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Lj1g3v0213210.2

Overview

Field Value
Gene ID Lj1g3v0213210
Transcript ID Lj1g3v0213210.2
Related isoforms 1
Lotus japonicus genome version MG20 v3.0
Description
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 18 18
Phobius 19 43 25
TMHMM 20 42 23
Phobius 44 54 11
TMHMM 52 71 20
Phobius 55 71 17
Phobius 72 82 11
Phobius 83 101 19
TMHMM 83 101 19
Phobius 102 112 11
Phobius 113 136 24
TMHMM 116 138 23
Phobius 137 145 9

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 8

Expression data

Expression pattern

Expression pattern of Lj1g3v0213210.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…

Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0213210.2, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.