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Lj1g3v0672150.1

Overview

Field Value
Gene ID Lj1g3v0672150
Transcript ID Lj1g3v0672150.1
Lotus japonicus genome version MG20 v3.0
Description chromoplast heme oxygenase 1 [Medicago sativa] gi|300431417|gb|ADK12637.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PIRSF
PIRSF030219
20 282 263 5.50E-130
IPR016951
PANTHER
PTHR35703:SF2
52 282 231 3.40E-120 –
PANTHER
PTHR35703
52 282 231 3.40E-120 –
Gene3D
G3DSA:1.20.910.10
67 280 214 9.50E-76
IPR016084
CDD
cd00232
73 281 209 3.14E-53 –
SUPERFAMILY
SSF48613
82 280 199 2.16E-43
IPR016084
Pfam
PF01126
110 277 168 4.50E-13
IPR016053

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004392
Molecular function Heme oxygenase (decyclizing) activity Catalysis of the reaction: heme + 3 donor-H2 + 3 O2 = biliverdin + Fe2+ + CO + 3 acceptor + 3 H2O.
Subterm of
GO:0006788
Biological process Heme oxidation The chemical reactions and pathways resulting in the loss of electrons from one or more atoms in heme.
Subterm of
Part of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

Genome browser

LORE1 insertions 20

Expression data

Expression pattern

Expression pattern of Lj1g3v0672150.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0672150.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.