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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0715570 |
| Transcript ID | Lj1g3v0715570.1 |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | Transmembrane protein 63C [Medicago truncatula] gi|357517913|ref|XP_003629245.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 27 | 27 | – | – | |
| PANTHER | 1 | 600 | 600 | 4.90E-230 | – | |
| PANTHER | 1 | 600 | 600 | 4.90E-230 | – | |
| TMHMM | 28 | 47 | 20 | – | – | |
| Phobius | 28 | 47 | 20 | – | – | |
| Phobius | 48 | 96 | 49 | – | – | |
| Pfam | 60 | 159 | 100 | 1.70E-11 | ||
| Phobius | 97 | 121 | 25 | – | – | |
| TMHMM | 98 | 120 | 23 | – | – | |
| Phobius | 122 | 140 | 19 | – | – | |
| TMHMM | 140 | 162 | 23 | – | – | |
| Phobius | 141 | 162 | 22 | – | – | |
| Phobius | 163 | 398 | 236 | – | – | |
| Coils | 302 | 322 | 21 | – | – | |
| Pfam | 304 | 386 | 83 | 2.80E-06 | ||
| Pfam | 397 | 582 | 186 | 8.80E-13 | ||
| TMHMM | 399 | 421 | 23 | – | – | |
| Phobius | 399 | 422 | 24 | – | – | |
| Phobius | 423 | 448 | 26 | – | – | |
| TMHMM | 449 | 471 | 23 | – | – | |
| Phobius | 449 | 471 | 23 | – | – | |
| Phobius | 472 | 491 | 20 | – | – | |
| TMHMM | 492 | 514 | 23 | – | – | |
| Phobius | 492 | 513 | 22 | – | – | |
| Phobius | 514 | 553 | 40 | – | – | |
| Phobius | 554 | 576 | 23 | – | – | |
| TMHMM | 554 | 576 | 23 | – | – | |
| Phobius | 577 | 653 | 77 | – | – | |
| PANTHER | 644 | 800 | 157 | 4.90E-230 | – | |
| PANTHER | 644 | 800 | 157 | 4.90E-230 | – | |
| Pfam | 646 | 732 | 87 | 1.60E-12 | ||
| Phobius | 654 | 684 | 31 | – | – | |
| TMHMM | 660 | 682 | 23 | – | – | |
| Phobius | 685 | 709 | 25 | – | – | |
| Phobius | 710 | 733 | 24 | – | – | |
| TMHMM | 711 | 733 | 23 | – | – | |
| Phobius | 734 | 739 | 6 | – | – | |
| Phobius | 740 | 757 | 18 | – | – | |
| Phobius | 758 | 801 | 44 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj1g3v0715570.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0715570.1, powered by CORGI.
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