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| Field | Value |
|---|---|
| Gene ID | Lj1g3v0913340 |
| Transcript ID | Lj1g3v0913340.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: auxin-induced protein 5NG4-like [Glycine max] gi|356515983|ref|XP_003526676.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 360 | 360 | 6.90E-219 | ||
| PANTHER | 1 | 360 | 360 | 6.90E-219 | – | |
| Phobius | 1 | 11 | 11 | – | – | |
| TMHMM | 11 | 30 | 20 | – | – | |
| Phobius | 12 | 30 | 19 | – | – | |
| Pfam | 15 | 155 | 141 | 8.30E-09 | ||
| Phobius | 31 | 41 | 11 | – | – | |
| TMHMM | 42 | 64 | 23 | – | – | |
| Phobius | 42 | 62 | 21 | – | – | |
| SUPERFAMILY | 50 | 158 | 109 | 8.11E-07 | – | |
| Phobius | 63 | 73 | 11 | – | – | |
| Phobius | 74 | 99 | 26 | – | – | |
| TMHMM | 79 | 101 | 23 | – | – | |
| Phobius | 100 | 104 | 5 | – | – | |
| Phobius | 105 | 127 | 23 | – | – | |
| TMHMM | 108 | 127 | 20 | – | – | |
| Phobius | 128 | 138 | 11 | – | – | |
| Phobius | 139 | 159 | 21 | – | – | |
| TMHMM | 142 | 164 | 23 | – | – | |
| Phobius | 160 | 185 | 26 | – | – | |
| TMHMM | 185 | 207 | 23 | – | – | |
| Phobius | 186 | 207 | 22 | – | – | |
| Pfam | 190 | 328 | 139 | 7.30E-09 | ||
| Phobius | 208 | 222 | 15 | – | – | |
| TMHMM | 222 | 241 | 20 | – | – | |
| Phobius | 223 | 241 | 19 | – | – | |
| Phobius | 242 | 255 | 14 | – | – | |
| TMHMM | 254 | 273 | 20 | – | – | |
| Phobius | 256 | 273 | 18 | – | – | |
| Phobius | 274 | 284 | 11 | – | – | |
| TMHMM | 283 | 305 | 23 | – | – | |
| Phobius | 285 | 305 | 21 | – | – | |
| Phobius | 306 | 310 | 5 | – | – | |
| Phobius | 311 | 330 | 20 | – | – | |
| TMHMM | 312 | 329 | 18 | – | – | |
| Phobius | 331 | 360 | 30 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. |
Expression pattern of Lj1g3v0913340.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v0913340.2, powered by CORGI.
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