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Lj1g3v0948580.1

Overview

Field Value
Gene ID Lj1g3v0948580
Transcript ID Lj1g3v0948580.1
Lotus japonicus genome version MG20 v3.0
Description PREDICTED: abscisic acid receptor PYL8-like [Glycine max] gi|356546160|ref|XP_003541499.1|
Working Lj name n.a.

Sequence information

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 19 19
Phobius 20 43 24
Phobius 44 272 229
PANTHER 74 271 198 2.70E-151
PANTHER 74 271 198 2.70E-151
Gene3D 99 256 158 4.50E-47
SUPERFAMILY 116 255 140 1.63E-31
Pfam 117 258 142 6.50E-19
CDD 118 258 141 2.00E-32

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

LORE1 insertions 12

Expression data

Expression pattern

Expression pattern of Lj1g3v0948580.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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Co-expressed genes

A list of the top 25 highly co-expressed genes of Lj1g3v0948580.1, powered by CORGI.

Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.