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| Field | Value |
|---|---|
| Gene ID | Lj1g3v1008860 |
| Transcript ID | Lj1g3v1008860.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: oligopeptide transporter 6-like [Glycine max] gi|356507574|ref|XP_003522539.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 45 | 45 | – | – | |
| MobiDBLite | 1 | 24 | 24 | – | – | |
| PANTHER | 11 | 735 | 725 | 0 | – | |
| PANTHER | 11 | 735 | 725 | 0 | – | |
| TIGRFAM | 19 | 701 | 683 | 5.60E-186 | ||
| TIGRFAM | 27 | 700 | 674 | 4.70E-209 | ||
| Pfam | 42 | 698 | 657 | 3.00E-173 | ||
| TMHMM | 43 | 65 | 23 | – | – | |
| Phobius | 46 | 66 | 21 | – | – | |
| Phobius | 67 | 77 | 11 | – | – | |
| Phobius | 78 | 99 | 22 | – | – | |
| Phobius | 100 | 118 | 19 | – | – | |
| TMHMM | 119 | 141 | 23 | – | – | |
| Phobius | 119 | 145 | 27 | – | – | |
| Phobius | 146 | 150 | 5 | – | – | |
| Phobius | 151 | 172 | 22 | – | – | |
| TMHMM | 151 | 172 | 22 | – | – | |
| Phobius | 173 | 212 | 40 | – | – | |
| Phobius | 213 | 231 | 19 | – | – | |
| TMHMM | 213 | 232 | 20 | – | – | |
| Phobius | 232 | 284 | 53 | – | – | |
| TMHMM | 257 | 279 | 23 | – | – | |
| Phobius | 285 | 307 | 23 | – | – | |
| TMHMM | 286 | 308 | 23 | – | – | |
| Phobius | 308 | 318 | 11 | – | – | |
| Phobius | 319 | 338 | 20 | – | – | |
| Phobius | 339 | 357 | 19 | – | – | |
| Phobius | 358 | 382 | 25 | – | – | |
| TMHMM | 360 | 382 | 23 | – | – | |
| Phobius | 383 | 416 | 34 | – | – | |
| Phobius | 417 | 438 | 22 | – | – | |
| TMHMM | 417 | 436 | 20 | – | – | |
| Phobius | 439 | 443 | 5 | – | – | |
| Phobius | 444 | 465 | 22 | – | – | |
| TMHMM | 446 | 468 | 23 | – | – | |
| Phobius | 466 | 528 | 63 | – | – | |
| TMHMM | 481 | 503 | 23 | – | – | |
| TMHMM | 528 | 550 | 23 | – | – | |
| Phobius | 529 | 551 | 23 | – | – | |
| Phobius | 552 | 598 | 47 | – | – | |
| Phobius | 599 | 619 | 21 | – | – | |
| TMHMM | 602 | 624 | 23 | – | – | |
| Phobius | 620 | 627 | 8 | – | – | |
| Phobius | 628 | 644 | 17 | – | – | |
| TMHMM | 644 | 666 | 23 | – | – | |
| Phobius | 645 | 649 | 5 | – | – | |
| Phobius | 650 | 667 | 18 | – | – | |
| Phobius | 668 | 678 | 11 | – | – | |
| Phobius | 679 | 700 | 22 | – | – | |
| TMHMM | 687 | 709 | 23 | – | – | |
| Phobius | 701 | 735 | 35 | – | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of Lj1g3v1008860.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj1g3v1008860.1, powered by CORGI.
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